RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 FAM74A4Q5TZK3 123 aa10.23□□□□□ -0.77
SEC13-210ENST00000428626 Q6ZSA8 131 aa10.23□□□□□ -0.77
SEC13-210ENST00000428626 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
SEC13-210ENST00000428626 MAP1LC3BQ9GZQ8 125 aa10.23□□□□□ -0.77
SEC13-210ENST00000428626 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
SEC13-210ENST00000428626 ZNF674Q2M3X9 581 aa10.22□□□□□ -0.77
SEC13-210ENST00000428626 NIT1Q86X76 327 aa10.22□□□□□ -0.77
SEC13-210ENST00000428626 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
SEC13-210ENST00000428626 SFRP2Q96HF1 295 aa10.22□□□□□ -0.77
SEC13-210ENST00000428626 ZFP30Q9Y2G7 519 aa10.22□□□□□ -0.77
SEC13-210ENST00000428626 TRAV8-3A0A0A6YYJ7 113 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 ARPC5O15511 151 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 LTAP01374 205 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 C1QBP02746 253 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 FAM162BQ5T6X4 162 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 OR11H4Q8NGC9 324 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 FMC1Q96HJ9 113 aa10.21□□□□□ -0.77
SEC13-210ENST00000428626 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.77
SEC13-210ENST00000428626 A0A087WWC5 75 aa10.2□□□□□ -0.78
SEC13-210ENST00000428626 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
SEC13-210ENST00000428626 SMLR1H3BR10 107 aa10.2□□□□□ -0.78
SEC13-210ENST00000428626 M0R381 172 aa10.2□□□□□ -0.78
SEC13-210ENST00000428626 RHODO00212 210 aa10.2□□□□□ -0.78
SEC13-210ENST00000428626 SYT8Q8NBV8 401 aa10.2□□□□□ -0.78
SEC13-210ENST00000428626 UBE2G1P62253 170 aa10.19□□□□□ -0.78
SEC13-210ENST00000428626 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
SEC13-210ENST00000428626 PHLDA3Q9Y5J5 127 aa10.19□□□□□ -0.78
SEC13-210ENST00000428626 TPT1P13693 172 aaKnown RBP10.18□□□□□ -0.78
SEC13-210ENST00000428626 RPL19P84098 196 aaKnown RBP10.18□□□□□ -0.78
SEC13-210ENST00000428626 CST9LP1Q5W188 147 aa10.18□□□□□ -0.78
SEC13-210ENST00000428626 PAGE4O60829 102 aa10.17□□□□□ -0.78
SEC13-210ENST00000428626 UBE2D3P61077 147 aa10.17□□□□□ -0.78
SEC13-210ENST00000428626 UBE2D2P62837 147 aa10.17□□□□□ -0.78
SEC13-210ENST00000428626 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
SEC13-210ENST00000428626 LRP1Q07954 4544 aaKnown RBP10.17□□□□□ -0.78
SEC13-210ENST00000428626 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
SEC13-210ENST00000428626 AKR1C3P42330 323 aa10.16□□□□□ -0.78
SEC13-210ENST00000428626 ZFP82Q8N141 532 aa10.16□□□□□ -0.78
SEC13-210ENST00000428626 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
SEC13-210ENST00000428626 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
SEC13-210ENST00000428626 UBE2WQ96B02 151 aa10.16□□□□□ -0.78
SEC13-210ENST00000428626 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 A0A1B0GV50 99 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 SCO2A0A1W2PP80 73 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 ATRAIDQ6UW56 229 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 TCEAL7Q9BRU2 100 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 MLST8Q9BVC4 326 aa10.15□□□□□ -0.78
SEC13-210ENST00000428626 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 MUC21A0A0G2JKD1 596 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 MUC21A0A140T8X8 626 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 OR10G8Q8NGN5 311 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 URGCP-MRPS24S4R325 110 aa10.14□□□□□ -0.79
SEC13-210ENST00000428626 KRTAP10-4P60372 401 aaPredicted RBP10.13□□□□□ -0.79
SEC13-210ENST00000428626 RPL36AP83881 106 aaKnown RBP10.13□□□□□ -0.79
SEC13-210ENST00000428626 ENHOQ6UWT2 76 aa10.13□□□□□ -0.79
SEC13-210ENST00000428626 STOML3Q8TAV4 291 aa10.13□□□□□ -0.79
SEC13-210ENST00000428626 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
SEC13-210ENST00000428626 SFT2D1Q8WV19 159 aa10.13□□□□□ -0.79
SEC13-210ENST00000428626 RPL36ALQ969Q0 106 aaKnown RBP10.13□□□□□ -0.79
SEC13-210ENST00000428626 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
SEC13-210ENST00000428626 A0A087WX48 190 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 RBFOX3A6NFN3 312 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 RGS21Q2M5E4 152 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 Q8N976 141 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 RMI2Q96E14 147 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 CHCHD7Q9BUK0 85 aa10.12□□□□□ -0.79
SEC13-210ENST00000428626 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
SEC13-210ENST00000428626 SNAI2O43623 268 aa10.11□□□□□ -0.79
SEC13-210ENST00000428626 SEC11BP0C7V7 166 aa10.11□□□□□ -0.79
SEC13-210ENST00000428626 RAB4BP61018 213 aa10.11□□□□□ -0.79
SEC13-210ENST00000428626 MPV17L2Q567V2 206 aa10.11□□□□□ -0.79
SEC13-210ENST00000428626 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
SEC13-210ENST00000428626 CXCL1P09341 107 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 ZNF345Q14585 488 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 ZNF56Q15929 161 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 NTM-AS1Q6ZSK4 140 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
SEC13-210ENST00000428626 TMEM262E9PQX1 116 aa10.09□□□□□ -0.79
SEC13-210ENST00000428626 SSTP61278 116 aa10.09□□□□□ -0.79
SEC13-210ENST00000428626 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
SEC13-210ENST00000428626 CIRBP-AS1Q8TBR5 109 aa10.09□□□□□ -0.79
SEC13-210ENST00000428626 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
SEC13-210ENST00000428626 UMAD1C9J7I0 102 aa10.08□□□□□ -0.8
SEC13-210ENST00000428626 J3QL48 77 aa10.08□□□□□ -0.8
SEC13-210ENST00000428626 S100A9P06702 114 aaKnown RBP10.08□□□□□ -0.8
SEC13-210ENST00000428626 OR5AL1P0C617 328 aa10.08□□□□□ -0.8
SEC13-210ENST00000428626 CCL20P78556 96 aa10.08□□□□□ -0.8
SEC13-210ENST00000428626 ELOBQ15370 118 aa10.08□□□□□ -0.8
SEC13-210ENST00000428626 DERL1Q9BUN8 251 aa10.08□□□□□ -0.8
SEC13-210ENST00000428626 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms