RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 RS1O15537 224 aa8.89□□□□□ -0.99
TRIM39-207ENST00000428404 NHLRC4P0CG21 123 aaPredicted RBP8.89□□□□□ -0.99
TRIM39-207ENST00000428404 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
TRIM39-207ENST00000428404 RNF185Q96GF1 192 aa8.89□□□□□ -0.99
TRIM39-207ENST00000428404 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
TRIM39-207ENST00000428404 SAMD10Q9BYL1 202 aa8.89□□□□□ -0.99
TRIM39-207ENST00000428404 GAGE12BA1L429 117 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 GAGE7O76087 117 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 HLA-DQA1P01909 254 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 MT-ND6P03923 174 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 GAGE12FP0CL80 117 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 GAGE12GP0CL81 117 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 GAGE12IP0CL82 117 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 SMIM15Q7Z3B0 74 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 DPH3P1Q9H4G8 78 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
TRIM39-207ENST00000428404 A0A087WWL8 130 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 TRAV4A0A0B4J268 109 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 TEX48A0A1B0GUV7 120 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 PHOX2AO14813 284 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 RAB4AP20338 218 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 RAB4BP61018 213 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 SLAQ13239 276 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 ZFP2Q6ZN57 461 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 AMN1Q8IY45 258 aa8.87□□□□□ -0.99
TRIM39-207ENST00000428404 CIDEAO60543 219 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 DEFB130BP0DP73 79 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 DEFB130AP0DP74 79 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
TRIM39-207ENST00000428404 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
TRIM39-207ENST00000428404 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 FRZBQ92765 325 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
TRIM39-207ENST00000428404 TRAPPC1Q9Y5R8 145 aa8.86□□□□□ -0.99
TRIM39-207ENST00000428404 TRGV2A0A075B6R0 118 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 RHODO00212 210 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 APCSP02743 223 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 TRGC2P03986 189 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
TRIM39-207ENST00000428404 U3KQK5 164 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 NACAE9PAV3 2078 aa8.85□□□□□ -0.99
TRIM39-207ENST00000428404 DAD1P61803 113 aa8.84□□□□□ -0.99
TRIM39-207ENST00000428404 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
TRIM39-207ENST00000428404 FAM74A4Q5TZK3 123 aa8.84□□□□□ -0.99
TRIM39-207ENST00000428404 Q6ZSN1 163 aa8.84□□□□□ -0.99
TRIM39-207ENST00000428404 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
TRIM39-207ENST00000428404 M0QY20 66 aa8.83□□□□□ -1
TRIM39-207ENST00000428404 IGHV3-53P01767 116 aa8.83□□□□□ -1
TRIM39-207ENST00000428404 FHL2Q14192 279 aa8.83□□□□□ -1
TRIM39-207ENST00000428404 MRAP2Q96G30 205 aa8.83□□□□□ -1
TRIM39-207ENST00000428404 IGHV3-73A0A0B4J1V6 119 aa8.82□□□□□ -1
TRIM39-207ENST00000428404 GAS8-AS1O95177 125 aa8.82□□□□□ -1
TRIM39-207ENST00000428404 PPBPP02775 128 aa8.82□□□□□ -1
TRIM39-207ENST00000428404 MGPP08493 103 aa8.82□□□□□ -1
TRIM39-207ENST00000428404 GATA1P15976 413 aaPredicted RBP8.82□□□□□ -1
TRIM39-207ENST00000428404 KIAA1644Q3SXP7 199 aa8.82□□□□□ -1
TRIM39-207ENST00000428404 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
TRIM39-207ENST00000428404 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
TRIM39-207ENST00000428404 F5H697 171 aa8.81□□□□□ -1
TRIM39-207ENST00000428404 HOXA5P20719 270 aa8.81□□□□□ -1
TRIM39-207ENST00000428404 NRACQ8N912 160 aa8.81□□□□□ -1
TRIM39-207ENST00000428404 C11orf45Q8TAV5 145 aa8.81□□□□□ -1
TRIM39-207ENST00000428404 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
TRIM39-207ENST00000428404 D6R8Y8 96 aa8.8□□□□□ -1
TRIM39-207ENST00000428404 SMKR1H3BMG3 65 aa8.8□□□□□ -1
TRIM39-207ENST00000428404 ATP5G1P05496 136 aa8.8□□□□□ -1
TRIM39-207ENST00000428404 CKS2P33552 79 aa8.8□□□□□ -1
TRIM39-207ENST00000428404 ZNF56Q15929 161 aa8.8□□□□□ -1
TRIM39-207ENST00000428404 ORMDL3Q8N138 153 aa8.8□□□□□ -1
TRIM39-207ENST00000428404 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 NCR2O95944 276 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 NANOS2P60321 138 aaKnown RBP8.79□□□□□ -1
TRIM39-207ENST00000428404 Q6ZTC4 211 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 PRELID3AQ96N28 172 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 Q9UF83 564 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 HHLA3Q9XRX5 114 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
TRIM39-207ENST00000428404 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 TRBV6-5A0A0K0K1A5 114 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 PRSS47A8MTI9 375 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 H7C1H1 209 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 TNFRSF6BO95407 300 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 SRIP30626 198 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 CRYBA4P53673 196 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 RPL39LQ96EH5 51 aaKnown RBP8.78□□□□□ -1
TRIM39-207ENST00000428404 NIT2Q9NQR4 276 aa8.78□□□□□ -1
TRIM39-207ENST00000428404 TGP01266 2768 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 K7EQD1 137 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 PPP1R17O96001 155 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 NPYP01303 97 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 P0DMU3 169 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 FAM231AP0DMU4 169 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms