RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MED13LQ71F56 2210 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 B9D2Q9BPU9 175 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 AGPAT4-IT1Q9H0P7 198 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 DSCAML1Q8TD84 2053 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 Q8NFD4 153 aa11.29□□□□□ -0.6
PTPN13-203ENST00000427191 FHL1Q13642 323 aa11.29□□□□□ -0.6
PTPN13-203ENST00000427191 TRBV6-1A0A0K0K1D8 114 aa11.29□□□□□ -0.6
PTPN13-203ENST00000427191 TMEM89A2RUT3 159 aa11.29□□□□□ -0.6
PTPN13-203ENST00000427191 BRK1Q8WUW1 75 aa11.29□□□□□ -0.6
PTPN13-203ENST00000427191 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
PTPN13-203ENST00000427191 CTRLP40313 264 aa11.28□□□□□ -0.6
PTPN13-203ENST00000427191 UQCRQO14949 82 aa11.27□□□□□ -0.6
PTPN13-203ENST00000427191 GNRH2O43555 120 aa11.27□□□□□ -0.6
PTPN13-203ENST00000427191 RNF144BQ7Z419 303 aa11.27□□□□□ -0.6
PTPN13-203ENST00000427191 IGHV4-28A0A0C4DH34 117 aa11.27□□□□□ -0.6
PTPN13-203ENST00000427191 Q6ZQT7 251 aa11.27□□□□□ -0.6
PTPN13-203ENST00000427191 Q6ZR03 302 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 C5orf38Q86SI9 138 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 CRIPAKQ8N1N5 446 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 IL17DQ8TAD2 202 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 ADAMTS9Q9P2N4 1935 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 WIPF3A6NGB9 483 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 G3V4G9 280 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 IGLV3-1P01715 115 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 GP9P14770 177 aa11.27□□□□□ -0.61
PTPN13-203ENST00000427191 LY6HO94772 140 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 Q6ZUT4 128 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 WDR86Q86TI4 376 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 RS1O15537 224 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 FAM240AA0A1B0GVK7 77 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 Q9HAA7 133 aa11.26□□□□□ -0.61
PTPN13-203ENST00000427191 C2orf16Q68DN1 1984 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 K7EMT4 169 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 ZNRD1Q9P1U0 126 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 ARHGAP32A7KAX9 2087 aa11.25□□□□□ -0.61
PTPN13-203ENST00000427191 A0A096LPF7 62 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 TRBV10-1A0A0K0K1A3 114 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 H7C423 109 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 COX7BP24311 80 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
PTPN13-203ENST00000427191 LECT2O14960 151 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 HHLA3Q9XRX5 114 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
PTPN13-203ENST00000427191 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 H0Y9J4 135 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 SEM1Q6ZVN7 128 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 IGKV4-1P06312 121 aa11.24□□□□□ -0.61
PTPN13-203ENST00000427191 A0A0J9YY99 117 aa11.23□□□□□ -0.61
PTPN13-203ENST00000427191 BPY2O14599 106 aa11.23□□□□□ -0.61
PTPN13-203ENST00000427191 DSCAMO60469 2012 aa11.23□□□□□ -0.61
PTPN13-203ENST00000427191 LTBP1Q14766 1721 aa11.22□□□□□ -0.61
PTPN13-203ENST00000427191 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
PTPN13-203ENST00000427191 MIAQ16674 131 aa11.22□□□□□ -0.61
PTPN13-203ENST00000427191 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
PTPN13-203ENST00000427191 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
PTPN13-203ENST00000427191 INSL3P51460 131 aa11.21□□□□□ -0.61
PTPN13-203ENST00000427191 PRR14LQ5THK1 2151 aa11.21□□□□□ -0.61
PTPN13-203ENST00000427191 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.62
PTPN13-203ENST00000427191 I3L2K1 104 aa11.21□□□□□ -0.62
PTPN13-203ENST00000427191 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 NDUFV3P56181 108 aaKnown RBP11.2□□□□□ -0.62
PTPN13-203ENST00000427191 C10orf105Q8TEF2 133 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 PTPRQQ9UMZ3 2332 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 TEX22C9J3V5 150 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 FAM208BQ5VWN6 2430 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 CENPVL3A0A0U1RRI6 287 aa11.2□□□□□ -0.62
PTPN13-203ENST00000427191 FXYD2P54710 66 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 UFSP1Q6NVU6 142 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 PRRC2AP48634 2157 aaKnown RBP11.19□□□□□ -0.62
PTPN13-203ENST00000427191 ALPK3Q96L96 1907 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
PTPN13-203ENST00000427191 ODF1Q14990 250 aa11.18□□□□□ -0.62
PTPN13-203ENST00000427191 CEP192Q8TEP8 1941 aa11.18□□□□□ -0.62
PTPN13-203ENST00000427191 C4orf3Q8WVX3 66 aa11.18□□□□□ -0.62
PTPN13-203ENST00000427191 FANCD2OSQ96PS1 177 aa11.18□□□□□ -0.62
PTPN13-203ENST00000427191 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
PTPN13-203ENST00000427191 ANKRD39Q53RE8 183 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 MAPK1IP1LQ8NDC0 245 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 K7EIM0 57 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 WFDC2Q14508 124 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 SPTSSBQ8NFR3 76 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 IMUPQ9GZP8 106 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 IGLV10-54A0A075B6I4 117 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 NCR3O14931 201 aa11.17□□□□□ -0.62
PTPN13-203ENST00000427191 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms