RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 DEFB135Q30KP9 77 aa13.83□□□□□ -0.19
ARHGEF28-203ENST00000426542 PRB2P02812 416 aaPredicted RBP13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 ANKRD39Q53RE8 183 aa13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 C4orf3Q8WVX3 66 aa13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 IGF2-ASQ6U949 168 aa13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 BAALCQ8WXS3 180 aa13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 NUPR1O60356 82 aa13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 GTSF1Q8WW33 167 aa13.83□□□□□ -0.2
ARHGEF28-203ENST00000426542 DEFB125Q8N687 156 aa13.82□□□□□ -0.2
ARHGEF28-203ENST00000426542 NDUFB1O75438 58 aa13.82□□□□□ -0.2
ARHGEF28-203ENST00000426542 DEFB1P60022 68 aa13.82□□□□□ -0.2
ARHGEF28-203ENST00000426542 Q8N7P7 452 aa13.82□□□□□ -0.2
ARHGEF28-203ENST00000426542 IGKV3D-7A0A0C4DH55 119 aa13.81□□□□□ -0.2
ARHGEF28-203ENST00000426542 TOMM6Q96B49 74 aa13.81□□□□□ -0.2
ARHGEF28-203ENST00000426542 FAM167A-AS1Q96KT0 104 aa13.81□□□□□ -0.2
ARHGEF28-203ENST00000426542 K7EMT4 169 aa13.81□□□□□ -0.2
ARHGEF28-203ENST00000426542 RNF138Q8WVD3 245 aa13.8□□□□□ -0.2
ARHGEF28-203ENST00000426542 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF28-203ENST00000426542 MYCNOSP40205 109 aa13.8□□□□□ -0.2
ARHGEF28-203ENST00000426542 KIR2DL5BA0A0G2JN68 375 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 KIR2DL5BA0A0G2JPC4 375 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 NREPQ16612 68 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 KIR2DL5AQ8N109 375 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 A0A0B4J2C4 111 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 Q6ZSR3 168 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 SEM1Q6ZVN7 128 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 GPHB5Q86YW7 130 aa13.79□□□□□ -0.2
ARHGEF28-203ENST00000426542 WFDC9Q8NEX5 89 aa13.78□□□□□ -0.2
ARHGEF28-203ENST00000426542 DAZAP2Q15038 168 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF28-203ENST00000426542 ODF3L1Q8IXM7 274 aa13.78□□□□□ -0.2
ARHGEF28-203ENST00000426542 E7EUB6 86 aa13.77□□□□□ -0.2
ARHGEF28-203ENST00000426542 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.2
ARHGEF28-203ENST00000426542 KLK12Q9UKR0 248 aa13.77□□□□□ -0.2
ARHGEF28-203ENST00000426542 TRBV12-3P01733 135 aa13.77□□□□□ -0.21
ARHGEF28-203ENST00000426542 TMEM61Q8N0U2 210 aa13.77□□□□□ -0.21
ARHGEF28-203ENST00000426542 SPAG11BQ08648 103 aa13.76□□□□□ -0.21
ARHGEF28-203ENST00000426542 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
ARHGEF28-203ENST00000426542 TTTY13Q9BZ97 58 aa13.76□□□□□ -0.21
ARHGEF28-203ENST00000426542 MED14OSP0DP75 135 aa13.76□□□□□ -0.21
ARHGEF28-203ENST00000426542 MP68P56378 58 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 B5MCH6 92 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 H3BQ85 93 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 FXYD2P54710 66 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 TDRG1Q3Y452 100 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 FANCD2OSQ96PS1 177 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 A0A1B0GX51 115 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 PSMB8P28062 276 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 LINC01620Q4KN68 170 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 MDFICQ9P1T7 246 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 PROP1O75360 226 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 IGLV1-47P01700 117 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 SIRPDQ9H106 197 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 UNQ9165/PRO28630Q6UXU0 137 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 SMAD5-AS1Q9Y6J3 95 aa13.75□□□□□ -0.21
ARHGEF28-203ENST00000426542 LECT2O14960 151 aa13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 SS18L2Q9UHA2 77 aa13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 KLK5Q9Y337 293 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 IGLV2-14P01704 120 aa13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 TMEM89A2RUT3 159 aa13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 C4orf48Q5BLP8 95 aa13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 CLEC2BQ92478 149 aa13.74□□□□□ -0.21
ARHGEF28-203ENST00000426542 LGALS9O00182 355 aa13.73□□□□□ -0.21
ARHGEF28-203ENST00000426542 CXCL5P42830 114 aa13.73□□□□□ -0.21
ARHGEF28-203ENST00000426542 COA6Q5JTJ3 125 aaKnown RBP13.73□□□□□ -0.21
ARHGEF28-203ENST00000426542 DIRC1Q969H9 104 aa13.73□□□□□ -0.21
ARHGEF28-203ENST00000426542 C11orf86A6NJI1 115 aa13.73□□□□□ -0.21
ARHGEF28-203ENST00000426542 CTRLP40313 264 aa13.73□□□□□ -0.21
ARHGEF28-203ENST00000426542 E9PLD3 99 aa13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 DYSFO75923 2080 aa13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 C14orf132Q9NPU4 83 aa13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 MIR7-3HGQ8N6C7 128 aa13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 TMEM263Q8WUH6 116 aaKnown RBP13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 NOTCH4Q99466 2003 aa13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
ARHGEF28-203ENST00000426542 RIF1Q5UIP0 2472 aaKnown RBP13.71□□□□□ -0.21
ARHGEF28-203ENST00000426542 GTF3C1Q12789 2109 aa13.71□□□□□ -0.21
ARHGEF28-203ENST00000426542 A0A1W2PNU3 283 aaPredicted RBP13.71□□□□□ -0.22
ARHGEF28-203ENST00000426542 WFDC11Q8NEX6 87 aa13.71□□□□□ -0.22
ARHGEF28-203ENST00000426542 DENND4CQ5VZ89 1909 aa13.71□□□□□ -0.22
ARHGEF28-203ENST00000426542 A6NDX4 124 aa13.71□□□□□ -0.22
ARHGEF28-203ENST00000426542 MALRD1Q5VYJ5 2156 aa13.7□□□□□ -0.22
ARHGEF28-203ENST00000426542 DNAJC9-AS1A6NH13 148 aa13.7□□□□□ -0.22
ARHGEF28-203ENST00000426542 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
ARHGEF28-203ENST00000426542 A0A0J9YX75 114 aa13.7□□□□□ -0.22
ARHGEF28-203ENST00000426542 HIGD1BQ9P298 99 aa13.69□□□□□ -0.22
ARHGEF28-203ENST00000426542 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
ARHGEF28-203ENST00000426542 FAM236AA0A1B0GUQ0 79 aa13.69□□□□□ -0.22
ARHGEF28-203ENST00000426542 FAM236BA0A1B0GV22 79 aa13.69□□□□□ -0.22
ARHGEF28-203ENST00000426542 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
ARHGEF28-203ENST00000426542 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
ARHGEF28-203ENST00000426542 WFDC2Q14508 124 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 JMJD7-PLA2G4BH0Y9G9 81 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 ATOX1O00244 68 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 TEN1Q86WV5 123 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 CEMP1Q6PRD7 247 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 PRO0255Q9UI72 69 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 KIF26AQ9ULI4 1882 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 LYPD6Q86Y78 171 aa13.68□□□□□ -0.22
ARHGEF28-203ENST00000426542 MSMPQ1L6U9 139 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms