RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 GTSCR1Q86UQ5 136 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 C14orf178Q8N769 122 aaPredicted RBP6.96□□□□□ -1.3
HMGB4-201ENST00000425537 POM121L12Q8N7R1 296 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 LINC01587Q99440 93 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 GOLT1BQ9Y3E0 138 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 A8MWV9 139 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 F5H697 171 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 M0R2P5 195 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 CRXO43186 299 aaPredicted RBP6.95□□□□□ -1.3
HMGB4-201ENST00000425537 FCER1GP30273 86 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 FXYD7P58549 80 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 RPL32P62910 135 aaKnown RBP6.95□□□□□ -1.3
HMGB4-201ENST00000425537 LAGE3Q14657 143 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
HMGB4-201ENST00000425537 RBMY1BA6NDE4 496 aaKnown RBP6.94□□□□□ -1.3
HMGB4-201ENST00000425537 RBMY1EA6NEQ0 496 aaKnown RBP6.94□□□□□ -1.3
HMGB4-201ENST00000425537 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 RHODO00212 210 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 ATP5LO75964 103 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 RBMY1DP0C7P1 496 aaKnown RBP6.94□□□□□ -1.3
HMGB4-201ENST00000425537 SUMO2P61956 95 aaKnown RBP6.94□□□□□ -1.3
HMGB4-201ENST00000425537 SPATA12Q7Z6I5 190 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 NRACQ8N912 160 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 CITED1Q99966 193 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 SMIM2Q9BVW6 85 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 ST20Q9HBF5 79 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 MDFICQ9P1T7 246 aa6.94□□□□□ -1.3
HMGB4-201ENST00000425537 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 HTN1P15515 57 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 ZNF56Q15929 161 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 C3orf56Q8N813 242 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 ZNF747Q9BV97 191 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 XCL2Q9UBD3 114 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 ATRQ13535 2644 aa6.93□□□□□ -1.3
HMGB4-201ENST00000425537 TRAV26-2A0A0B4J265 109 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 VCYO14598 125 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 ZNF124Q15973 351 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 RASL10AQ92737 203 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 KIR2DL4Q99706 377 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 EDA2RQ9HAV5 297 aa6.92□□□□□ -1.3
HMGB4-201ENST00000425537 IGLV2-18A0A075B6J9 118 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 KIR2DL5BA0A0G2JN68 375 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 KIR2DL5BA0A0G2JPC4 375 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 TRBV6-5A0A0K0K1A5 114 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 CIDEAO60543 219 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 NUDT3O95989 172 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 RBMY1A1P0DJD3 496 aaKnown RBP6.91□□□□□ -1.3
HMGB4-201ENST00000425537 RBMY1CP0DJD4 496 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 GATA1P15976 413 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-201ENST00000425537 DDTP30046 118 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 RBMY1FQ15415 496 aaKnown RBP6.91□□□□□ -1.3
HMGB4-201ENST00000425537 KRTAP21-3Q3LHN1 58 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 ZNF705AQ6ZN79 300 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-201ENST00000425537 KIR2DL5AQ8N109 375 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
HMGB4-201ENST00000425537 ZMAT5Q9UDW3 170 aaKnown RBP6.91□□□□□ -1.3
HMGB4-201ENST00000425537 AGRNO00468 2067 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 A0A087WWL8 130 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 LCE2BO14633 110 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 CRYGDP07320 174 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 LINC00315P59091 139 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 DEFA6Q01524 100 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 ZFP2Q6ZN57 461 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 Q8N976 141 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
HMGB4-201ENST00000425537 C16orf74Q96GX8 76 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 CSTL1Q9H114 145 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
HMGB4-201ENST00000425537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.89□□□□□ -1.31
HMGB4-201ENST00000425537 SPRY2O43597 315 aa6.89□□□□□ -1.31
HMGB4-201ENST00000425537 SPATA45Q537H7 98 aa6.89□□□□□ -1.31
HMGB4-201ENST00000425537 C1orf158Q8N1D5 194 aa6.89□□□□□ -1.31
HMGB4-201ENST00000425537 DNAJC30Q96LL9 226 aa6.89□□□□□ -1.31
HMGB4-201ENST00000425537 PAM16Q9Y3D7 125 aa6.89□□□□□ -1.31
HMGB4-201ENST00000425537 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
HMGB4-201ENST00000425537 MUC4Q99102 2169 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 IGHV3OR16-12A0A075B7B8 117 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 A0A096LNJ9 63 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 H0Y8G0 127 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 M0QY20 66 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 PRSS1P07477 247 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
HMGB4-201ENST00000425537 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
HMGB4-201ENST00000425537 RHOHQ15669 191 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 Q6ZN92 141 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms