RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 TCTE3Q8IZS6 198 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 C10orf126Q8N4M7 172 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 MANBALQ9NQG1 85 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 MSRB1Q9NZV6 116 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 TNFRSF18Q9Y5U5 241 aa8.62□□□□□ -1.03
SGCE-203ENST00000425444 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 GAGE12JA6NER3 117 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 RHODO00212 210 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 GAGE1Q13065 139 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 GAGE4Q13068 117 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 GAGE5Q13069 117 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 GAGE13Q4V321 117 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 DNLZQ5SXM8 178 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 PRR27Q6MZM9 219 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
SGCE-203ENST00000425444 ZFP82Q8N141 532 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 SAMD10Q9BYL1 202 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 JPT2Q9H910 190 aa8.61□□□□□ -1.03
SGCE-203ENST00000425444 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
SGCE-203ENST00000425444 LELP1Q5T871 98 aa8.6□□□□□ -1.03
SGCE-203ENST00000425444 Q6ZSN1 163 aa8.6□□□□□ -1.03
SGCE-203ENST00000425444 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
SGCE-203ENST00000425444 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
SGCE-203ENST00000425444 A0A087WWL8 130 aa8.59□□□□□ -1.03
SGCE-203ENST00000425444 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
SGCE-203ENST00000425444 RPL35P42766 123 aaKnown RBP8.59□□□□□ -1.03
SGCE-203ENST00000425444 CCL20P78556 96 aa8.59□□□□□ -1.03
SGCE-203ENST00000425444 RPL19P84098 196 aaKnown RBP8.59□□□□□ -1.03
SGCE-203ENST00000425444 LINC01556Q5JQF7 62 aa8.59□□□□□ -1.03
SGCE-203ENST00000425444 SLC51BQ86UW2 128 aa8.59□□□□□ -1.03
SGCE-203ENST00000425444 C14orf178Q8N769 122 aaPredicted RBP8.59□□□□□ -1.03
SGCE-203ENST00000425444 IFNA1P01562 189 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 IGHV3-30P01768 117 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 IGHV3-33P01772 117 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 C1QBP02746 253 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 IGHV3-30-3P0DP02 117 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 IGHV3-30-5P0DP03 117 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
SGCE-203ENST00000425444 SULT1A2P50226 295 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 AKAP14Q86UN6 197 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 SFRP2Q96HF1 295 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 MLST8Q9BVC4 326 aa8.58□□□□□ -1.04
SGCE-203ENST00000425444 TRAV1-1A0A0B4J248 108 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 PSCAO43653 123 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 UFSP1Q6NVU6 142 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 Q6ZNX1 250 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 C11orf52Q96A22 123 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 Q9HAA7 133 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
SGCE-203ENST00000425444 CXCL1P09341 107 aa8.56□□□□□ -1.04
SGCE-203ENST00000425444 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
SGCE-203ENST00000425444 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
SGCE-203ENST00000425444 A0A087WTM6 91 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 A0A087WWC5 75 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 PDE6DO43924 150 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 GNG4P50150 75 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
SGCE-203ENST00000425444 ZNF56Q15929 161 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 SPANXN1Q5VSR9 72 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 OR10AG1Q8NH19 301 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 DAZAP1Q96EP5 407 aaKnown RBP8.55□□□□□ -1.04
SGCE-203ENST00000425444 Q9UF83 564 aa8.55□□□□□ -1.04
SGCE-203ENST00000425444 MUC21A0A0G2JKD1 596 aa8.54□□□□□ -1.04
SGCE-203ENST00000425444 MUC21A0A140T8X8 626 aa8.54□□□□□ -1.04
SGCE-203ENST00000425444 IBA57-AS1B1ANH7 110 aa8.54□□□□□ -1.04
SGCE-203ENST00000425444 BCL2P10415 239 aa8.54□□□□□ -1.04
SGCE-203ENST00000425444 SSTP61278 116 aa8.54□□□□□ -1.04
SGCE-203ENST00000425444 RPL36AP83881 106 aaKnown RBP8.54□□□□□ -1.04
SGCE-203ENST00000425444 RPL36ALQ969Q0 106 aaKnown RBP8.54□□□□□ -1.04
SGCE-203ENST00000425444 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
SGCE-203ENST00000425444 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
SGCE-203ENST00000425444 SNAI2O43623 268 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 KRTAP10-1P60331 282 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 C9orf62Q8N4C0 152 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 MED9Q9NWA0 146 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 URGCP-MRPS24S4R325 110 aa8.53□□□□□ -1.04
SGCE-203ENST00000425444 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.04
SGCE-203ENST00000425444 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 RAB19A4D1S5 217 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 OR5AL1P0C617 328 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 LAGE3Q14657 143 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 OR2D3Q8NGH3 330 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 SMIM12Q96EX1 92 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 AP1S3Q96PC3 154 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 VAX2Q9UIW0 290 aa8.52□□□□□ -1.05
SGCE-203ENST00000425444 F5H697 171 aa8.51□□□□□ -1.05
SGCE-203ENST00000425444 IGLV2-8P01709 118 aa8.51□□□□□ -1.05
SGCE-203ENST00000425444 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
SGCE-203ENST00000425444 RPS20P60866 119 aaKnown RBP8.51□□□□□ -1.05
SGCE-203ENST00000425444 RAB4BP61018 213 aa8.51□□□□□ -1.05
SGCE-203ENST00000425444 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
SGCE-203ENST00000425444 Q8N3U1 123 aa8.51□□□□□ -1.05
SGCE-203ENST00000425444 SSBP4Q9BWG4 385 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms