RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 UNQ9165/PRO28630Q6UXU0 137 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 ABCA12Q86UK0 2595 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 FXYD2P54710 66 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 ZMAT4Q9H898 229 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 DOPEY1Q5JWR5 2465 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 NHP2Q9NX24 153 aaKnown RBP9.87□□□□□ -0.83
COL12A1-205ENST00000425443 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 PRR9Q5T870 116 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
COL12A1-205ENST00000425443 IFITM1P13164 125 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 OR4X2Q8NGF9 303 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 OR9G4Q8NGQ1 327 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 OR10J6PQ8NGY7 276 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 S100A4P26447 101 aaKnown RBP9.86□□□□□ -0.83
COL12A1-205ENST00000425443 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 PTPN13Q12923 2485 aa9.86□□□□□ -0.83
COL12A1-205ENST00000425443 SRSF9Q13242 221 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL12A1-205ENST00000425443 MRPL53Q96EL3 112 aaKnown RBP9.85□□□□□ -0.83
COL12A1-205ENST00000425443 USMG5Q96IX5 58 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 B4DSR2 109 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 NDUFA4O00483 81 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 C20orf173Q96LM9 149 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 C1orf43Q9BWL3 253 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 IGSF10Q6WRI0 2623 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 J3QLI3 93 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 IGHG2P01859 326 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 MAPKAPK5-AS1Q8N8E1 139 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 NRACQ8N912 160 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 U3KQE9 123 aa9.85□□□□□ -0.83
COL12A1-205ENST00000425443 TMEM8BA6NDV4 472 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 C9JAW5 83 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 MGPP08493 103 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 PKIGQ9Y2B9 76 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 SONP18583 2426 aaKnown RBP9.84□□□□□ -0.83
COL12A1-205ENST00000425443 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
COL12A1-205ENST00000425443 A6NDX4 124 aa9.83□□□□□ -0.84
COL12A1-205ENST00000425443 Q6ZS46 218 aa9.83□□□□□ -0.84
COL12A1-205ENST00000425443 IGKCP01834 107 aa9.83□□□□□ -0.84
COL12A1-205ENST00000425443 C14orf178Q8N769 122 aaPredicted RBP9.83□□□□□ -0.84
COL12A1-205ENST00000425443 NXT2Q9NPJ8 142 aaKnown RBP9.83□□□□□ -0.84
COL12A1-205ENST00000425443 MRPL35Q9NZE8 188 aaKnown RBP9.83□□□□□ -0.84
COL12A1-205ENST00000425443 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 RNASE4P34096 147 aaKnown RBP9.82□□□□□ -0.84
COL12A1-205ENST00000425443 C19orf54Q5BKX5 351 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 LINC00477Q96M19 166 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 CRIP2P52943 208 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-205ENST00000425443 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 Q8N8P6 123 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 OR13C6PQ8NH95 151 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 RHPN1-AS1Q9BWJ2 59 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 RHODO00212 210 aa9.82□□□□□ -0.84
COL12A1-205ENST00000425443 PHLDA1Q8WV24 401 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-205ENST00000425443 KLK5Q9Y337 293 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-205ENST00000425443 OVOL1O14753 267 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 H3BUA1 57 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 AVPP01185 164 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 MAPK1IP1LQ8NDC0 245 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 MYOZ3Q8TDC0 251 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 RPL39LQ96EH5 51 aaKnown RBP9.81□□□□□ -0.84
COL12A1-205ENST00000425443 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
COL12A1-205ENST00000425443 SNCGO76070 127 aa9.8□□□□□ -0.84
COL12A1-205ENST00000425443 TMEM126AQ9H061 195 aa9.8□□□□□ -0.84
COL12A1-205ENST00000425443 TRAV21A0A0B4J279 112 aa9.8□□□□□ -0.84
COL12A1-205ENST00000425443 A0A1W2PRX2 142 aa9.8□□□□□ -0.84
COL12A1-205ENST00000425443 GNRH2O43555 120 aa9.8□□□□□ -0.84
COL12A1-205ENST00000425443 PHLDA3Q9Y5J5 127 aa9.8□□□□□ -0.84
COL12A1-205ENST00000425443 ANKRD17O75179 2603 aaKnown RBP9.8□□□□□ -0.84
COL12A1-205ENST00000425443 DAZ1Q9NQZ3 744 aaKnown RBP9.8□□□□□ -0.84
COL12A1-205ENST00000425443 CCDC168Q8NDH2 2452 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 DPM2O94777 84 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 LAGE3Q14657 143 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 C4orf26Q17RF5 130 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 WNK1Q9H4A3 2382 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 NAV2Q8IVL1 2488 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 CRLF1O75462 422 aa9.79□□□□□ -0.84
COL12A1-205ENST00000425443 IGHV4-59P01825 116 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 DSCR9P59020 149 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 LENEPQ9Y5L5 61 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 PRB1P04280 392 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 ASIPP42127 132 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 DEFB112Q30KQ8 113 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 HIGD1BQ9P298 99 aa9.78□□□□□ -0.84
COL12A1-205ENST00000425443 J3KT08 172 aa9.77□□□□□ -0.85
COL12A1-205ENST00000425443 CHCHD5Q9BSY4 110 aa9.77□□□□□ -0.85
COL12A1-205ENST00000425443 C2CD3Q4AC94 2353 aa9.77□□□□□ -0.85
COL12A1-205ENST00000425443 ZNF462Q96JM2 2506 aa9.77□□□□□ -0.85
COL12A1-205ENST00000425443 CEND1Q8N111 149 aa9.77□□□□□ -0.85
COL12A1-205ENST00000425443 LINC01356Q8N9X3 169 aa9.77□□□□□ -0.85
COL12A1-205ENST00000425443 COX6B1P14854 86 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms