RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TRBV7-9A0A0J9YWB2 115 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 GAGE12HA6NDE8 117 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 GNRH2O43555 120 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 IGKCP01834 107 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 SEC11AP67812 179 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 CD300EQ496F6 205 aaPredicted RBP8.04□□□□□ -1.12
CUX1-205ENST00000425244 OR9G4Q8NGQ1 327 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 CITED1Q99966 193 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 LENEPQ9Y5L5 61 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 A0A0G2JLM5 398 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 RAB37Q96AX2 223 aa8.04□□□□□ -1.12
CUX1-205ENST00000425244 DAZ1Q9NQZ3 744 aaKnown RBP8.04□□□□□ -1.12
CUX1-205ENST00000425244 NSD1Q96L73 2696 aaPredicted RBP8.03□□□□□ -1.12
CUX1-205ENST00000425244 IGHV4-4A0A075B6R2 117 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 H3BUA1 57 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 ATP5LO75964 103 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 DPM2O94777 84 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
CUX1-205ENST00000425244 AP1S3Q96PC3 154 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 MRPL35Q9NZE8 188 aaKnown RBP8.03□□□□□ -1.12
CUX1-205ENST00000425244 A6NDN8 102 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 K7EP34 96 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 LY6G6DO95868 133 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 HIST2H2BDQ6DRA6 164 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
CUX1-205ENST00000425244 SORL1Q92673 2214 aa8.02□□□□□ -1.13
CUX1-205ENST00000425244 ADAMTSL5Q6ZMM2 481 aa8.02□□□□□ -1.13
CUX1-205ENST00000425244 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
CUX1-205ENST00000425244 TSSC4Q9Y5U2 329 aaPredicted RBP8.02□□□□□ -1.13
CUX1-205ENST00000425244 TEP1Q99973 2627 aaKnown RBP8.02□□□□□ -1.13
CUX1-205ENST00000425244 DEFB104AQ8WTQ1 72 aa8.02□□□□□ -1.13
CUX1-205ENST00000425244 TNFRSF18Q9Y5U5 241 aa8.02□□□□□ -1.13
CUX1-205ENST00000425244 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 IGLV1-40P01703 118 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 GCSHP23434 173 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 DPH3P1Q9H4G8 78 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 F8P00451 2351 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 DNAJC9-AS1A6NH13 148 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 H3BUT2 72 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 IGKV3-20P01619 116 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 SUMO2P61956 95 aaKnown RBP8.01□□□□□ -1.13
CUX1-205ENST00000425244 RASL10AQ92737 203 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 JMJD8Q96S16 334 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 ZMAT4Q9H898 229 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 ESM1Q9NQ30 184 aa8.01□□□□□ -1.13
CUX1-205ENST00000425244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
CUX1-205ENST00000425244 SIVA1O15304 175 aa8□□□□□ -1.13
CUX1-205ENST00000425244 RPL24P83731 157 aaKnown RBP8□□□□□ -1.13
CUX1-205ENST00000425244 CITED2Q99967 270 aaPredicted RBP8□□□□□ -1.13
CUX1-205ENST00000425244 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
CUX1-205ENST00000425244 FN1P02751 2386 aaKnown RBP8□□□□□ -1.13
CUX1-205ENST00000425244 INAFM1C9JVW0 142 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 ZNF688P0C7X2 276 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 TRAV12-3A0A0B4J271 114 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 C9orf118A6NHY6 69 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
CUX1-205ENST00000425244 ID1P41134 155 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 TEX29Q8N6K0 151 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 FAM19A4Q96LR4 140 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 CHAC1Q9BUX1 264 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 ZNF702PQ9H963 129 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 A0A087WX48 190 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 H3BRM9 83 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 CFHR3Q02985 330 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 PSMG4Q5JS54 123 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 FAM159AQ6UWV7 190 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 C11orf44Q8N8P7 122 aa7.99□□□□□ -1.13
CUX1-205ENST00000425244 MRPL16Q9NX20 251 aaKnown RBP7.99□□□□□ -1.13
CUX1-205ENST00000425244 ORMDL2Q53FV1 153 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 JPT2Q9H910 190 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 TRBV25-1A0A075B6N4 114 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 A0A087WWL8 130 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 K7EMI3 77 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 CD7P09564 240 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 FXYD2P54710 66 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 KHDC1LQ5JSQ8 128 aa7.98□□□□□ -1.13
CUX1-205ENST00000425244 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 F5H697 171 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 K7ERJ3 54 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 PSMB8P28062 276 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 DCANP1Q8TF63 244 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 MUC4Q99102 2169 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 FOXI2Q6ZQN5 318 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 MAPKAPK5-AS1Q8N8E1 139 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 C20orf78Q9BR46 151 aa7.97□□□□□ -1.13
CUX1-205ENST00000425244 PLNP26678 52 aa7.96□□□□□ -1.13
CUX1-205ENST00000425244 SYNJ2BPP57105 145 aa7.96□□□□□ -1.13
CUX1-205ENST00000425244 WNK1Q9H4A3 2382 aa7.96□□□□□ -1.13
CUX1-205ENST00000425244 AGRNO00468 2067 aa7.96□□□□□ -1.13
CUX1-205ENST00000425244 H7C1H1 209 aa7.96□□□□□ -1.14
CUX1-205ENST00000425244 K7EMT4 169 aa7.96□□□□□ -1.14
CUX1-205ENST00000425244 FAM74A4Q5TZK3 123 aa7.96□□□□□ -1.14
CUX1-205ENST00000425244 APRG1Q8IVJ8 170 aa7.96□□□□□ -1.14
CUX1-205ENST00000425244 TOMM6Q96B49 74 aa7.96□□□□□ -1.14
CUX1-205ENST00000425244 RNF183Q96D59 192 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms