RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TLN1Q9Y490 2541 aaKnown RBP11.37□□□□□ -0.59
C9orf3-204ENST00000424143 TMEM89A2RUT3 159 aa11.36□□□□□ -0.59
C9orf3-204ENST00000424143 A8MWV9 139 aa11.36□□□□□ -0.59
C9orf3-204ENST00000424143 CFHR3Q02985 330 aa11.36□□□□□ -0.59
C9orf3-204ENST00000424143 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 LOC107984156A0A0G2JMH3 177 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 TMEM223A0PJW6 202 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 J3KRW8 73 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 TRPT1Q86TN4 253 aaKnown RBP11.35□□□□□ -0.59
C9orf3-204ENST00000424143 ARL17AQ8IVW1 177 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 ZNRF2Q8NHG8 242 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 UBTD1Q9HAC8 227 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 M0QY20 66 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 TCL1BO95988 128 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
C9orf3-204ENST00000424143 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
C9orf3-204ENST00000424143 KALRNO60229 2985 aa11.34□□□□□ -0.59
C9orf3-204ENST00000424143 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-204ENST00000424143 F6UB75 175 aa11.34□□□□□ -0.59
C9orf3-204ENST00000424143 TSPEAR-AS2P59090 65 aa11.34□□□□□ -0.59
C9orf3-204ENST00000424143 CKS1BP61024 79 aa11.34□□□□□ -0.59
C9orf3-204ENST00000424143 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
C9orf3-204ENST00000424143 ADGRG4Q8IZF6 3080 aa11.33□□□□□ -0.59
C9orf3-204ENST00000424143 SPRY2O43597 315 aa11.33□□□□□ -0.6
C9orf3-204ENST00000424143 RPL11P62913 178 aaKnown RBP11.33□□□□□ -0.6
C9orf3-204ENST00000424143 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
C9orf3-204ENST00000424143 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
C9orf3-204ENST00000424143 IGHV3-33P01772 117 aa11.32□□□□□ -0.6
C9orf3-204ENST00000424143 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
C9orf3-204ENST00000424143 CLEC2AQ6UVW9 174 aa11.32□□□□□ -0.6
C9orf3-204ENST00000424143 C20orf203Q8NBC4 194 aa11.32□□□□□ -0.6
C9orf3-204ENST00000424143 PF4V1P10720 104 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 RPL39P62891 51 aaKnown RBP11.31□□□□□ -0.6
C9orf3-204ENST00000424143 Q6ZS46 218 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 Q6ZUT4 128 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
C9orf3-204ENST00000424143 RNF183Q96D59 192 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 LINC00527Q9UJ94 153 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 GVINP1Q7Z2Y8 2422 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 F5H697 171 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 I3L3M4 83 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 DEFB1P60022 68 aa11.31□□□□□ -0.6
C9orf3-204ENST00000424143 M0R2P5 195 aa11.3□□□□□ -0.6
C9orf3-204ENST00000424143 PIK3CD-AS1Q5SR53 167 aa11.3□□□□□ -0.6
C9orf3-204ENST00000424143 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
C9orf3-204ENST00000424143 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
C9orf3-204ENST00000424143 RHODO00212 210 aa11.29□□□□□ -0.6
C9orf3-204ENST00000424143 IGHV4-39P01824 125 aa11.29□□□□□ -0.6
C9orf3-204ENST00000424143 ZNF22P17026 224 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-204ENST00000424143 PIMREGQ9BSJ6 248 aa11.29□□□□□ -0.6
C9orf3-204ENST00000424143 JPT2Q9H910 190 aa11.29□□□□□ -0.6
C9orf3-204ENST00000424143 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
C9orf3-204ENST00000424143 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-204ENST00000424143 IGHV3-11P01762 117 aa11.28□□□□□ -0.6
C9orf3-204ENST00000424143 PTH2Q96A98 100 aa11.28□□□□□ -0.6
C9orf3-204ENST00000424143 CACNA1BQ00975 2339 aa11.28□□□□□ -0.6
C9orf3-204ENST00000424143 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 A0A087WWL8 130 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 TRBV30A0A0K0K1B3 111 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 A4D1N5 150 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 K7EQG2 157 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.6
C9orf3-204ENST00000424143 DMXL1Q9Y485 3027 aa11.27□□□□□ -0.6
C9orf3-204ENST00000424143 H3BUX3 64 aa11.27□□□□□ -0.61
C9orf3-204ENST00000424143 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.61
C9orf3-204ENST00000424143 IGLV4-3A0A075B6K6 122 aa11.26□□□□□ -0.61
C9orf3-204ENST00000424143 SLC25A20O43772 301 aa11.26□□□□□ -0.61
C9orf3-204ENST00000424143 PSMB8P28062 276 aa11.26□□□□□ -0.61
C9orf3-204ENST00000424143 MRPS36P82909 103 aaKnown RBP11.26□□□□□ -0.61
C9orf3-204ENST00000424143 FHL3Q13643 280 aa11.26□□□□□ -0.61
C9orf3-204ENST00000424143 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
C9orf3-204ENST00000424143 GEMIN7Q9H840 131 aaKnown RBP11.26□□□□□ -0.61
C9orf3-204ENST00000424143 MT-ATP8P03928 68 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
C9orf3-204ENST00000424143 EMP1P54849 157 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 XGP55808 180 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 ATXN8Q156A1 80 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 Q5PR19 223 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 TACC2O95359 2948 aa11.25□□□□□ -0.61
C9orf3-204ENST00000424143 A8MTW9 85 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 BLCAPP62952 87 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 ZNF56Q15929 161 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 Q8N1Y9 231 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 ZFHX2Q9C0A1 2572 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-204ENST00000424143 HRNRQ86YZ3 2850 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-204ENST00000424143 ASPMQ8IZT6 3477 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 IGHV4-61A0A0C4DH41 118 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-204ENST00000424143 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 LY6EQ16553 131 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
C9orf3-204ENST00000424143 IGHV3OR16-10A0A075B7F0 116 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms