RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 GRIFINA4D1Z8 144 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 SMLR1H3BR10 107 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 M0R381 172 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 PAGE4O60829 102 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 S100A9P06702 114 aaKnown RBP11.23□□□□□ -0.61
CCDC78-203ENST00000423653 C14orf178Q8N769 122 aaPredicted RBP11.23□□□□□ -0.61
CCDC78-203ENST00000423653 Q8N814 137 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 FAM213BQ8TBF2 198 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 FRZBQ92765 325 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 SAMD10Q9BYL1 202 aa11.23□□□□□ -0.61
CCDC78-203ENST00000423653 TMSB15BA0A087X1C1 80 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 A0A0D9SG52 128 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 KANTRA0A1W2PQU2 76 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 XGP55808 180 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 EIF5AP63241 154 aaKnown RBP11.22□□□□□ -0.61
CCDC78-203ENST00000423653 SFT2D1Q8WV19 159 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 SFRP2Q96HF1 295 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-203ENST00000423653 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
CCDC78-203ENST00000423653 HMSDA8MTL9 139 aa11.21□□□□□ -0.61
CCDC78-203ENST00000423653 BCL2L11O43521 198 aa11.21□□□□□ -0.61
CCDC78-203ENST00000423653 TMEM70Q9BUB7 260 aa11.21□□□□□ -0.61
CCDC78-203ENST00000423653 A0A087WWL8 130 aa11.2□□□□□ -0.62
CCDC78-203ENST00000423653 TRBV10-1A0A0K0K1A3 114 aa11.2□□□□□ -0.62
CCDC78-203ENST00000423653 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
CCDC78-203ENST00000423653 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
CCDC78-203ENST00000423653 A0A1B0GV50 99 aa11.19□□□□□ -0.62
CCDC78-203ENST00000423653 SCO2A0A1W2PP80 73 aa11.19□□□□□ -0.62
CCDC78-203ENST00000423653 CXCL1P09341 107 aa11.19□□□□□ -0.62
CCDC78-203ENST00000423653 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
CCDC78-203ENST00000423653 Q5VSD8 79 aa11.19□□□□□ -0.62
CCDC78-203ENST00000423653 Q8N3U1 123 aa11.19□□□□□ -0.62
CCDC78-203ENST00000423653 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
CCDC78-203ENST00000423653 RMI2Q96E14 147 aa11.19□□□□□ -0.62
CCDC78-203ENST00000423653 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
CCDC78-203ENST00000423653 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
CCDC78-203ENST00000423653 CHCHD7Q9BUK0 85 aa11.18□□□□□ -0.62
CCDC78-203ENST00000423653 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
CCDC78-203ENST00000423653 Q9UF83 564 aa11.18□□□□□ -0.62
CCDC78-203ENST00000423653 H2AFB1P0C5Y9 115 aa11.17□□□□□ -0.62
CCDC78-203ENST00000423653 BAGE2Q86Y30 109 aa11.17□□□□□ -0.62
CCDC78-203ENST00000423653 A0A087WX48 190 aa11.16□□□□□ -0.62
CCDC78-203ENST00000423653 MANBALQ9NQG1 85 aa11.16□□□□□ -0.62
CCDC78-203ENST00000423653 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
CCDC78-203ENST00000423653 ELOBQ15370 118 aa11.15□□□□□ -0.62
CCDC78-203ENST00000423653 ZNF56Q15929 161 aa11.15□□□□□ -0.62
CCDC78-203ENST00000423653 NIT1Q86X76 327 aa11.15□□□□□ -0.62
CCDC78-203ENST00000423653 MLST8Q9BVC4 326 aa11.15□□□□□ -0.62
CCDC78-203ENST00000423653 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 C1QBP02746 253 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 RAB4BP61018 213 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 UBE2D3P61077 147 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 UBE2D2P62837 147 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 RPL19P84098 196 aaKnown RBP11.14□□□□□ -0.63
CCDC78-203ENST00000423653 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.14□□□□□ -0.63
CCDC78-203ENST00000423653 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
CCDC78-203ENST00000423653 TEX46H3BTG2 121 aa11.13□□□□□ -0.63
CCDC78-203ENST00000423653 SNAI2O43623 268 aa11.13□□□□□ -0.63
CCDC78-203ENST00000423653 OR5AL1P0C617 328 aa11.13□□□□□ -0.63
CCDC78-203ENST00000423653 SPANXN1Q5VSR9 72 aa11.13□□□□□ -0.63
CCDC78-203ENST00000423653 TMUB2Q71RG4 321 aa11.13□□□□□ -0.63
CCDC78-203ENST00000423653 OR10G8Q8NGN5 311 aa11.13□□□□□ -0.63
CCDC78-203ENST00000423653 LECT2O14960 151 aa11.12□□□□□ -0.63
CCDC78-203ENST00000423653 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
CCDC78-203ENST00000423653 RAB5CP51148 216 aa11.12□□□□□ -0.63
CCDC78-203ENST00000423653 WFDC2Q14508 124 aa11.12□□□□□ -0.63
CCDC78-203ENST00000423653 EIF5AL1Q6IS14 154 aaKnown RBP11.12□□□□□ -0.63
CCDC78-203ENST00000423653 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
CCDC78-203ENST00000423653 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
CCDC78-203ENST00000423653 KLK12Q9UKR0 248 aa11.12□□□□□ -0.63
CCDC78-203ENST00000423653 IGKV2D-24A0A075B6R9 120 aa11.11□□□□□ -0.63
CCDC78-203ENST00000423653 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
CCDC78-203ENST00000423653 PKIAP61925 76 aa11.11□□□□□ -0.63
CCDC78-203ENST00000423653 HAMPP81172 84 aa11.11□□□□□ -0.63
CCDC78-203ENST00000423653 Q0VG73 95 aa11.11□□□□□ -0.63
CCDC78-203ENST00000423653 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
CCDC78-203ENST00000423653 TRBV6-8A0A0A6YYG3 113 aa11.1□□□□□ -0.63
CCDC78-203ENST00000423653 SMIM17P0DL12 118 aa11.1□□□□□ -0.63
CCDC78-203ENST00000423653 NEXN-AS1Q8NBZ9 246 aa11.1□□□□□ -0.63
CCDC78-203ENST00000423653 UBE2WQ96B02 151 aa11.1□□□□□ -0.63
CCDC78-203ENST00000423653 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
CCDC78-203ENST00000423653 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
CCDC78-203ENST00000423653 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
CCDC78-203ENST00000423653 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
CCDC78-203ENST00000423653 F5H697 171 aa11.09□□□□□ -0.63
CCDC78-203ENST00000423653 CRPP02741 224 aa11.09□□□□□ -0.63
CCDC78-203ENST00000423653 Q8N976 141 aa11.09□□□□□ -0.63
CCDC78-203ENST00000423653 TMEM262E9PQX1 116 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 CENPWQ5EE01 88 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 BAALCQ8WXS3 180 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 DAZAP1Q96EP5 407 aaKnown RBP11.08□□□□□ -0.64
CCDC78-203ENST00000423653 SMIM12Q96EX1 92 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 C1orf43Q9BWL3 253 aa11.08□□□□□ -0.64
CCDC78-203ENST00000423653 MUC21A0A0G2JKD1 596 aa11.07□□□□□ -0.64
CCDC78-203ENST00000423653 MUC21A0A140T8X8 626 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms