RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RAB14P61106 215 aa10.33□□□□□ -0.76
USB1-202ENST00000423271 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
USB1-202ENST00000423271 OCC1Q8TAD7 63 aa10.33□□□□□ -0.76
USB1-202ENST00000423271 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
USB1-202ENST00000423271 C9JQL5 133 aa10.32□□□□□ -0.76
USB1-202ENST00000423271 CDK2AP2O75956 126 aa10.32□□□□□ -0.76
USB1-202ENST00000423271 GATA1P15976 413 aaPredicted RBP10.32□□□□□ -0.76
USB1-202ENST00000423271 PTH2Q96A98 100 aa10.32□□□□□ -0.76
USB1-202ENST00000423271 DAZAP1Q96EP5 407 aaKnown RBP10.32□□□□□ -0.76
USB1-202ENST00000423271 SMIM7Q9BQ49 75 aa10.32□□□□□ -0.76
USB1-202ENST00000423271 BIN3Q9NQY0 253 aa10.32□□□□□ -0.76
USB1-202ENST00000423271 FAT1Q14517 4588 aa10.31□□□□□ -0.76
USB1-202ENST00000423271 RS1O15537 224 aa10.31□□□□□ -0.76
USB1-202ENST00000423271 CXCL1P09341 107 aa10.31□□□□□ -0.76
USB1-202ENST00000423271 PEA15Q15121 130 aa10.31□□□□□ -0.76
USB1-202ENST00000423271 SCRT2Q9NQ03 307 aa10.31□□□□□ -0.76
USB1-202ENST00000423271 LY96Q9Y6Y9 160 aa10.31□□□□□ -0.76
USB1-202ENST00000423271 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
USB1-202ENST00000423271 P01737 135 aa10.3□□□□□ -0.76
USB1-202ENST00000423271 FUSP35637 526 aaKnown RBP eCLIP10.3□□□□□ -0.76
USB1-202ENST00000423271 CFAP126Q5VTH2 177 aa10.3□□□□□ -0.76
USB1-202ENST00000423271 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
USB1-202ENST00000423271 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 GZMBP10144 247 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 CLLU1Q5K131 121 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 NUDT10Q8NFP7 164 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 RNASE7Q9H1E1 156 aaKnown RBP10.29□□□□□ -0.76
USB1-202ENST00000423271 JPT2Q9H910 190 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 PHLDA3Q9Y5J5 127 aa10.29□□□□□ -0.76
USB1-202ENST00000423271 DNAH8Q96JB1 4490 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 M0R381 172 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 SNAI2O43623 268 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
USB1-202ENST00000423271 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
USB1-202ENST00000423271 TRAV9-2A0A087WT02 112 aa10.27□□□□□ -0.77
USB1-202ENST00000423271 MUC21A0A0G2JKD1 596 aa10.27□□□□□ -0.77
USB1-202ENST00000423271 MUC21A0A140T8X8 626 aa10.27□□□□□ -0.77
USB1-202ENST00000423271 ERVFC1-1P60608 527 aa10.27□□□□□ -0.77
USB1-202ENST00000423271 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
USB1-202ENST00000423271 SSBP4Q9BWG4 385 aaPredicted RBP10.27□□□□□ -0.77
USB1-202ENST00000423271 MSRB1Q9NZV6 116 aa10.27□□□□□ -0.77
USB1-202ENST00000423271 A8MWV9 139 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 OR5AL1P0C617 328 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 IGLC6P0CF74 106 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 EVI2AP22794 236 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 RHOHQ15669 191 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 ZFP82Q8N141 532 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 FER1L6-AS1Q8NA97 138 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 SAMD10Q9BYL1 202 aa10.26□□□□□ -0.77
USB1-202ENST00000423271 RPP21Q9H633 154 aaKnown RBP10.26□□□□□ -0.77
USB1-202ENST00000423271 TRBV6-4A0A1B0GX49 114 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 XKRY2A2RUG3 117 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 CRYGDP07320 174 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 TIRAPP58753 221 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 TMEM241Q24JQ0 296 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 FAM231DQ6ZW35 169 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
USB1-202ENST00000423271 A0A087WTM6 91 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 GATCO43716 136 aaKnown RBP10.24□□□□□ -0.77
USB1-202ENST00000423271 CIDEAO60543 219 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 SSTP61278 116 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 SPANXN1Q5VSR9 72 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 Q6ZSN1 163 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 NAT8Q9UHE5 227 aa10.24□□□□□ -0.77
USB1-202ENST00000423271 A0A087WWL8 130 aa10.23□□□□□ -0.77
USB1-202ENST00000423271 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
USB1-202ENST00000423271 K7EP13 123 aa10.23□□□□□ -0.77
USB1-202ENST00000423271 EREGO14944 169 aa10.23□□□□□ -0.77
USB1-202ENST00000423271 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
USB1-202ENST00000423271 FAM74A4Q5TZK3 123 aa10.23□□□□□ -0.77
USB1-202ENST00000423271 ADIRFQ15847 76 aa10.22□□□□□ -0.77
USB1-202ENST00000423271 LINC01556Q5JQF7 62 aa10.22□□□□□ -0.77
USB1-202ENST00000423271 OR10J3Q5JRS4 329 aa10.22□□□□□ -0.77
USB1-202ENST00000423271 LYZL1Q6UWQ5 148 aa10.22□□□□□ -0.77
USB1-202ENST00000423271 C10orf126Q8N4M7 172 aa10.22□□□□□ -0.77
USB1-202ENST00000423271 ISOC2Q96AB3 205 aa10.22□□□□□ -0.77
USB1-202ENST00000423271 RHODO00212 210 aa10.21□□□□□ -0.77
USB1-202ENST00000423271 Q8N1X5 172 aa10.21□□□□□ -0.77
USB1-202ENST00000423271 OSTCQ9NRP0 149 aa10.21□□□□□ -0.77
USB1-202ENST00000423271 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
USB1-202ENST00000423271 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 F2Z2F3 143 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 LINC00694P0DN24 101 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms