RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
NPC1L1-203ENST00000423141 NHLRC4P0CG21 123 aaPredicted RBP12.52□□□□□ -0.41
NPC1L1-203ENST00000423141 IGHV1-69DA0A0B4J2H0 117 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 VCX2Q9H322 139 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 IGHV3-64A0A075B6Q5 118 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 CRLF1O75462 422 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 POLR2KP53803 58 aaKnown RBP12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 PAPPA-AS1Q5QFB9 102 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 VPS13CQ709C8 3753 aa12.51□□□□□ -0.41
NPC1L1-203ENST00000423141 B5MCH6 92 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 CDSNQ15517 529 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 SOCS3O14543 225 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 IGHV3-33P01772 117 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 ZNF876PQ49A33 203 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
NPC1L1-203ENST00000423141 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 PPP1R17O96001 155 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 SAA4P35542 130 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 TMEM219Q86XT9 240 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 PTPRZ1P23471 2315 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 F5H697 171 aa12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 TMEM263Q8WUH6 116 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-203ENST00000423141 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 A0A087WW49 117 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 SDHAF1A6NFY7 115 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 FAM19A4Q96LR4 140 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 ZNF580Q9UK33 172 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 OVOL1O14753 267 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 GAGE5Q13069 117 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 GAGE6Q13070 117 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 TMEM141Q96I45 108 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 TIMM17AQ99595 171 aa12.48□□□□□ -0.41
NPC1L1-203ENST00000423141 MED14OSP0DP75 135 aa12.47□□□□□ -0.41
NPC1L1-203ENST00000423141 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
NPC1L1-203ENST00000423141 ZNF256Q9Y2P7 627 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-203ENST00000423141 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
NPC1L1-203ENST00000423141 SRD5A1P18405 259 aa12.47□□□□□ -0.41
NPC1L1-203ENST00000423141 VCYO14598 125 aa12.46□□□□□ -0.41
NPC1L1-203ENST00000423141 NXPH4O95158 308 aa12.46□□□□□ -0.41
NPC1L1-203ENST00000423141 Q8N1Y9 231 aa12.46□□□□□ -0.41
NPC1L1-203ENST00000423141 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.41
NPC1L1-203ENST00000423141 TEX49A0A1B0GTD5 131 aa12.46□□□□□ -0.42
NPC1L1-203ENST00000423141 RHODO00212 210 aa12.46□□□□□ -0.42
NPC1L1-203ENST00000423141 IGHV4-39P01824 125 aa12.46□□□□□ -0.42
NPC1L1-203ENST00000423141 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.42
NPC1L1-203ENST00000423141 TCF15Q12870 199 aa12.45□□□□□ -0.42
NPC1L1-203ENST00000423141 C5orf56Q8N8D9 126 aa12.45□□□□□ -0.42
NPC1L1-203ENST00000423141 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
NPC1L1-203ENST00000423141 Q1RN00 199 aa12.45□□□□□ -0.42
NPC1L1-203ENST00000423141 C11orf71Q6IPW1 123 aa12.45□□□□□ -0.42
NPC1L1-203ENST00000423141 SPTAN1Q13813 2472 aaKnown RBP12.45□□□□□ -0.42
NPC1L1-203ENST00000423141 UBE2E1P51965 193 aa12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 NDUFV3P56181 108 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 GAGE2BQ13066 116 aa12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 GAGE2EQ4V326 116 aa12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 GAGE2DQ9UEU5 116 aa12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 SNCGO76070 127 aa12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 APRG1Q8IVJ8 170 aa12.44□□□□□ -0.42
NPC1L1-203ENST00000423141 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
NPC1L1-203ENST00000423141 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
NPC1L1-203ENST00000423141 CCDC179H3BU77 68 aa12.43□□□□□ -0.42
NPC1L1-203ENST00000423141 IGHV3-11P01762 117 aa12.43□□□□□ -0.42
NPC1L1-203ENST00000423141 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
NPC1L1-203ENST00000423141 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
NPC1L1-203ENST00000423141 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
NPC1L1-203ENST00000423141 A0A0B4J2C4 111 aa12.42□□□□□ -0.42
NPC1L1-203ENST00000423141 LEPROTO15243 131 aa12.42□□□□□ -0.42
NPC1L1-203ENST00000423141 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
NPC1L1-203ENST00000423141 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 M0QXV9 152 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 CCL21O00585 134 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 P0DMU3 169 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 ZNF22P17026 224 aaPredicted RBP12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 EDN2P20800 178 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
NPC1L1-203ENST00000423141 ATRXP46100 2492 aa12.4□□□□□ -0.42
NPC1L1-203ENST00000423141 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
NPC1L1-203ENST00000423141 A0A0J9YXV3 536 aa12.4□□□□□ -0.42
NPC1L1-203ENST00000423141 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
NPC1L1-203ENST00000423141 TRIAP1O43715 76 aa12.4□□□□□ -0.42
NPC1L1-203ENST00000423141 ATXN8Q156A1 80 aa12.4□□□□□ -0.42
NPC1L1-203ENST00000423141 KLLNB2CW77 178 aa12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 NDUFA4O00483 81 aa12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 C19orf54Q5BKX5 351 aa12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 MAP1AP78559 2803 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 FAM223BA6NKX1 122 aa12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 ZNF56Q15929 161 aa12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 FAM223AQ8IWN6 122 aa12.39□□□□□ -0.43
NPC1L1-203ENST00000423141 LGALS9O00182 355 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms