RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 NPBQ8NG41 125 aa13.56□□□□□ -0.24
TRAPPC10-203ENST00000422875 TP53TG3Q9ULZ0 132 aa13.56□□□□□ -0.24
TRAPPC10-203ENST00000422875 AJUBAQ96IF1 538 aa13.56□□□□□ -0.24
TRAPPC10-203ENST00000422875 DAND5Q8N907 189 aa13.56□□□□□ -0.24
TRAPPC10-203ENST00000422875 U3KQE9 123 aa13.56□□□□□ -0.24
TRAPPC10-203ENST00000422875 BAALC-AS2P0C853 105 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 Q8N9W7 124 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 CRLF1O75462 422 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 CTRLP40313 264 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 CITED1Q99966 193 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 TRAV13-2A0A0B4J235 113 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 WI2-2373I1.2A0A1W2PRP0 233 aa13.55□□□□□ -0.24
TRAPPC10-203ENST00000422875 HOXD3P31249 432 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC10-203ENST00000422875 C1orf229Q6ZS94 237 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC10-203ENST00000422875 C11orf86A6NJI1 115 aa13.54□□□□□ -0.24
TRAPPC10-203ENST00000422875 CRYGCP07315 174 aa13.54□□□□□ -0.24
TRAPPC10-203ENST00000422875 SRSF2Q01130 221 aaKnown RBP13.54□□□□□ -0.24
TRAPPC10-203ENST00000422875 PIEZO1Q92508 2521 aa13.54□□□□□ -0.24
TRAPPC10-203ENST00000422875 PIP4P1Q86T03 277 aa13.53□□□□□ -0.24
TRAPPC10-203ENST00000422875 BAALCQ8WXS3 180 aa13.53□□□□□ -0.24
TRAPPC10-203ENST00000422875 ZNF80P51504 273 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 FOXI1Q12951 378 aa13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 LINC01620Q4KN68 170 aa13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 C5orf38Q86SI9 138 aa13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 IGHG4P01861 327 aa13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 XCL1P47992 114 aa13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 NOP10Q9NPE3 64 aaKnown RBP13.52□□□□□ -0.24
TRAPPC10-203ENST00000422875 G3V4G9 280 aa13.52□□□□□ -0.25
TRAPPC10-203ENST00000422875 SMIM20Q8N5G0 67 aa13.52□□□□□ -0.25
TRAPPC10-203ENST00000422875 ZNF561-AS1K7EIQ3 104 aa13.52□□□□□ -0.25
TRAPPC10-203ENST00000422875 APRG1Q8IVJ8 170 aa13.52□□□□□ -0.25
TRAPPC10-203ENST00000422875 FANCD2OSQ96PS1 177 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 TRAV25A0A0B4J276 109 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 CGB3P0DN86 165 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 CGB7P0DN87 165 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 E9PLD3 99 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 ELANEP08246 267 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 IGHV4-38-2P0DP08 117 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 DAD1P61803 113 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 C16orf54Q6UWD8 224 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 ADAMTS9Q9P2N4 1935 aa13.51□□□□□ -0.25
TRAPPC10-203ENST00000422875 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 Q8N7P7 452 aa13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 IGHV4-61A0A0C4DH41 118 aa13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 MLST8Q9BVC4 326 aa13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 TMEM126AQ9H061 195 aa13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 SP5Q6BEB4 398 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 Q8N1Y9 231 aa13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 SPRY4Q9C004 299 aa13.5□□□□□ -0.25
TRAPPC10-203ENST00000422875 C3orf56Q8N813 242 aa13.49□□□□□ -0.25
TRAPPC10-203ENST00000422875 TRACP01848 142 aa13.49□□□□□ -0.25
TRAPPC10-203ENST00000422875 MBD6Q96DN6 1003 aa13.49□□□□□ -0.25
TRAPPC10-203ENST00000422875 OPRPNQ99935 248 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC10-203ENST00000422875 F8WEM9 126 aa13.48□□□□□ -0.25
TRAPPC10-203ENST00000422875 H3BUA1 57 aa13.48□□□□□ -0.25
TRAPPC10-203ENST00000422875 RNF114Q9Y508 228 aa13.48□□□□□ -0.25
TRAPPC10-203ENST00000422875 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
TRAPPC10-203ENST00000422875 Q96MF0 132 aa13.48□□□□□ -0.25
TRAPPC10-203ENST00000422875 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
TRAPPC10-203ENST00000422875 TOMM6Q96B49 74 aa13.47□□□□□ -0.25
TRAPPC10-203ENST00000422875 KIAA1549Q9HCM3 1950 aa13.47□□□□□ -0.25
TRAPPC10-203ENST00000422875 SLC25A29Q8N8R3 303 aa13.46□□□□□ -0.25
TRAPPC10-203ENST00000422875 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC10-203ENST00000422875 ZFP36P26651 326 aaKnown RBP13.46□□□□□ -0.25
TRAPPC10-203ENST00000422875 SLURP1P55000 103 aa13.46□□□□□ -0.25
TRAPPC10-203ENST00000422875 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.26
TRAPPC10-203ENST00000422875 C2orf16Q68DN1 1984 aa13.46□□□□□ -0.26
TRAPPC10-203ENST00000422875 TRAV26-1A0A087WT03 109 aa13.46□□□□□ -0.26
TRAPPC10-203ENST00000422875 HCFC1P51610 2035 aa13.45□□□□□ -0.26
TRAPPC10-203ENST00000422875 DSCR8Q96T75 97 aa13.45□□□□□ -0.26
TRAPPC10-203ENST00000422875 PRB1P04280 392 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 CLEC2BQ92478 149 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 A0A0J9YY99 117 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 C5orf56Q8N8D9 126 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 EIF4EBP1Q13541 118 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 SND1-IT1Q9HBX3 110 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 FAM236AA0A1B0GUQ0 79 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 FAM236BA0A1B0GV22 79 aa13.44□□□□□ -0.26
TRAPPC10-203ENST00000422875 IGKV3D-7A0A0C4DH55 119 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 TRBV6-1A0A0K0K1D8 114 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 TRAV4A0A0B4J268 109 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 TRBV12-3P01733 135 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 TIMM17AQ99595 171 aa13.43□□□□□ -0.26
TRAPPC10-203ENST00000422875 ARHGAP32A7KAX9 2087 aa13.42□□□□□ -0.26
TRAPPC10-203ENST00000422875 DEFB121Q5J5C9 76 aa13.42□□□□□ -0.26
TRAPPC10-203ENST00000422875 Q6ZQT7 251 aa13.42□□□□□ -0.26
TRAPPC10-203ENST00000422875 VPREB3Q9UKI3 123 aa13.42□□□□□ -0.26
TRAPPC10-203ENST00000422875 ZNF106Q9H2Y7 1883 aaKnown RBP13.42□□□□□ -0.26
TRAPPC10-203ENST00000422875 IGHV4-30-2A0A087WSY4 118 aa13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 IGKV2D-26A0A0A0MRZ7 120 aa13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 RPL32P62910 135 aaKnown RBP13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 CEMP1Q6PRD7 247 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 USP9YO00507 2555 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 PSCAO43653 123 aa13.41□□□□□ -0.26
TRAPPC10-203ENST00000422875 NKAPP1Q8N9T2 125 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms