RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ALKAL2Q6UX46 152 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 HSD17B11Q8NBQ5 300 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 UBE2WQ96B02 151 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 NDFIP1Q9BT67 221 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 EPDR1Q9UM22 224 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 GRIFINA4D1Z8 144 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 UMAD1C9J7I0 102 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 CIDEAO60543 219 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 STAG3L2P0CL84 134 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 STAG3L3P0CL85 134 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 GCHFRP30047 84 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 CDC34P49427 236 aaPredicted RBP5.27□□□□□ -1.57
VIM-202ENST00000421459 SULT1A2P50226 295 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 RAB5CP51148 216 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 SERF2P84101 59 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 SMUG1Q53HV7 270 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 NIT1Q86X76 327 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 ARL6IP6Q8N6S5 226 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 CYB561D1Q8N8Q1 229 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 Q8N976 141 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 C5orf17Q8NAS9 161 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 SYT8Q8NBV8 401 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 RAB24Q969Q5 203 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 PTH2Q96A98 100 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 SH3BGRL3Q9H299 93 aa5.27□□□□□ -1.57
VIM-202ENST00000421459 LRP2P98164 4655 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 A0A087WWL8 130 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 H3BVH4 76 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 OXTP01178 125 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 S100A4P26447 101 aaKnown RBP5.26□□□□□ -1.57
VIM-202ENST00000421459 CRIP1P50238 77 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 ZFP2Q6ZN57 461 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 SUN5Q8TC36 379 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 DAZAP1Q96EP5 407 aaKnown RBP5.26□□□□□ -1.57
VIM-202ENST00000421459 PLA2G2DQ9UNK4 145 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 TNXBP22105 4242 aa5.26□□□□□ -1.57
VIM-202ENST00000421459 TMSB15BA0A087X1C1 80 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 A8MWV9 139 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 M0R036 132 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 ARMS2P0C7Q2 107 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 ASIPP42127 132 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 TOR2AQ5JU69 321 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 FAM74A4Q5TZK3 123 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 ENHOQ6UWT2 76 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 LYPD6BQ8NI32 183 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 MED9Q9NWA0 146 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 ARL2-SNX15V9GYD0 113 aa5.25□□□□□ -1.57
VIM-202ENST00000421459 A0A087WWC5 75 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 TRAV1-1A0A0B4J248 108 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 SERTM2A0A1B0GWG4 89 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 LINC00862A6NCI5 91 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 B4DEV8 164 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 KRBOX1C9JBD0 128 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 PANO1I0J062 215 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 K7EQM0 130 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 MBP02144 154 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 FGF8P55075 233 aaPredicted RBP5.24□□□□□ -1.57
VIM-202ENST00000421459 UBE2G2P60604 165 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 RAB14P61106 215 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 RPL37AP61513 92 aaKnown RBP5.24□□□□□ -1.57
VIM-202ENST00000421459 BLOC1S1P78537 153 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 SAPCD1Q5SSQ6 148 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 RMI2Q96E14 147 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 ZC2HC1AQ96GY0 325 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 COX11Q9Y6N1 276 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 URGCP-MRPS24S4R325 110 aa5.24□□□□□ -1.57
VIM-202ENST00000421459 A0A087WX48 190 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 FABP5P3A8MUU1 101 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 TMEM262E9PQX1 116 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 M0R381 172 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 SH2D1AO60880 128 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 PRSS1P07477 247 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 FHITP49789 147 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 ZNF726P1Q15940 193 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 NDUFA5Q16718 116 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 AKR1C8PQ5T2L2 129 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 C15orf54Q8N8G6 183 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 MBD3L1Q8WWY6 194 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 IL36BQ9NZH7 164 aa5.23□□□□□ -1.57
VIM-202ENST00000421459 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
VIM-202ENST00000421459 USP17L23D6RBM5 183 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 CXorf1O96002 111 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 MPV17L2Q567V2 206 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 PIK3CD-AS1Q5SR53 167 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 ATRAIDQ6UW56 229 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 Q86TA4 180 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 FAM213BQ8TBF2 198 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 SFRP2Q96HF1 295 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 TMEM167BQ9NRX6 74 aa5.22□□□□□ -1.57
VIM-202ENST00000421459 MUC21A0A0G2JKD1 596 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 MUC21A0A140T8X8 626 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 CTXND1A0A1B0GTU2 59 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 PEX7O00628 323 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 HLA-DQA1P01909 254 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 H2AFB1P0C5Y9 115 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 UBE2D3P61077 147 aa5.21□□□□□ -1.58
VIM-202ENST00000421459 UBE2D2P62837 147 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms