RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 UBE2BP63146 152 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 LYPD6Q86Y78 171 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 RNF183Q96D59 192 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 A0A087X0K7 114 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 LY6LH3BQJ8 138 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 SMR3AQ99954 134 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 SFTA2Q6UW10 78 aa8.23□□□□□ -1.09
PTCH1-206ENST00000421141 DMRT1Q9Y5R6 373 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 KLF12Q9Y4X4 402 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 TYMSP04818 313 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 SMIM2Q9BVW6 85 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 PSMB8P28062 276 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 NEGR1Q7Z3B1 354 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 PFN2P35080 140 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 Q8N1Y9 231 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 LINC01006Q8NI28 216 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
PTCH1-206ENST00000421141 LAMTOR3Q9UHA4 124 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 V9GYV3 84 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 DEFB114Q30KQ6 69 aa8.22□□□□□ -1.09
PTCH1-206ENST00000421141 MKI67P46013 3256 aaKnown RBP8.22□□□□□ -1.09
PTCH1-206ENST00000421141 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.09
PTCH1-206ENST00000421141 EBI3Q14213 229 aa8.21□□□□□ -1.09
PTCH1-206ENST00000421141 CCDC140Q96MF4 163 aa8.21□□□□□ -1.09
PTCH1-206ENST00000421141 ZNF702PQ9H963 129 aa8.21□□□□□ -1.09
PTCH1-206ENST00000421141 LINC01548A6NM66 108 aa8.21□□□□□ -1.1
PTCH1-206ENST00000421141 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
PTCH1-206ENST00000421141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-206ENST00000421141 A0A0J9YX75 114 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 K7ERU9 68 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 NDUFA7O95182 113 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 ZNF503Q96F45 646 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 TRAV4A0A0B4J268 109 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 C5orf30Q96GV9 206 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 ESM1Q9NQ30 184 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 IGHV3-33P01772 117 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 IGHV3-30-3P0DP02 117 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
PTCH1-206ENST00000421141 HSD52Q0P140 79 aa8.19□□□□□ -1.1
PTCH1-206ENST00000421141 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
PTCH1-206ENST00000421141 POLR3KQ9Y2Y1 108 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-206ENST00000421141 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
PTCH1-206ENST00000421141 BBC3Q96PG8 261 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-206ENST00000421141 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
PTCH1-206ENST00000421141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-206ENST00000421141 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-206ENST00000421141 IGLC2P0DOY2 106 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 ODF3Q96PU9 254 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 PRO0255Q9UI72 69 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 EPG5Q9HCE0 2579 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 MIFP14174 115 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 COX7A2LO14548 114 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 HIST1H2BLQ99880 126 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 ACANP16112 2415 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 MTORP42345 2549 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 ZC2HC1BQ5TFG8 222 aa8.18□□□□□ -1.1
PTCH1-206ENST00000421141 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
PTCH1-206ENST00000421141 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
PTCH1-206ENST00000421141 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
PTCH1-206ENST00000421141 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
PTCH1-206ENST00000421141 ORAOV1Q8WV07 137 aa8.17□□□□□ -1.1
PTCH1-206ENST00000421141 SNHG12Q9BXW3 62 aa8.17□□□□□ -1.1
PTCH1-206ENST00000421141 DEFB131BA0A096LNP1 70 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 IL15RAQ13261 267 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
PTCH1-206ENST00000421141 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 Q0VG73 95 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 A0A1B0GWB2 263 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 hDV102S1A0JD36 115 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 CRYGBP07316 175 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 IGLV10-54A0A075B6I4 117 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 COLCA2A8K830 154 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
PTCH1-206ENST00000421141 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
PTCH1-206ENST00000421141 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.1
PTCH1-206ENST00000421141 C18orf32Q8TCD1 76 aa8.15□□□□□ -1.1
PTCH1-206ENST00000421141 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.1
PTCH1-206ENST00000421141 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.11
PTCH1-206ENST00000421141 MRPL36Q9P0J6 103 aaKnown RBP8.15□□□□□ -1.11
PTCH1-206ENST00000421141 TRAV26-1A0A087WT03 109 aa8.15□□□□□ -1.11
PTCH1-206ENST00000421141 TIRAPP58753 221 aa8.15□□□□□ -1.11
PTCH1-206ENST00000421141 CHD7Q9P2D1 2997 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 F8VRH5 84 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 NXPH4O95158 308 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 K7EN84 100 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 LINC00518Q8N0U6 118 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 F8P00451 2351 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms