RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 COX8CQ7Z4L0 72 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
MSH6-203ENST00000420813 FAM74A7A6NL05 159 aa11.54□□□□□ -0.56
MSH6-203ENST00000420813 TOR2AQ5JU69 321 aa11.54□□□□□ -0.56
MSH6-203ENST00000420813 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
MSH6-203ENST00000420813 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
MSH6-203ENST00000420813 H3BVH4 76 aa11.53□□□□□ -0.56
MSH6-203ENST00000420813 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
MSH6-203ENST00000420813 SAMD10Q9BYL1 202 aa11.53□□□□□ -0.56
MSH6-203ENST00000420813 KRBOX1C9JBD0 128 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 CRIP1P50238 77 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 HAMPP81172 84 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 DMRTA1Q5VZB9 504 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 Q8N3U1 123 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
MSH6-203ENST00000420813 ZC2HC1AQ96GY0 325 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 TCEAL7Q9BRU2 100 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 JPT2Q9H910 190 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 MYCBP2O75592 4640 aa11.52□□□□□ -0.57
MSH6-203ENST00000420813 DNAH8Q96JB1 4490 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 ARMS2P0C7Q2 107 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 RAB14P61106 215 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
MSH6-203ENST00000420813 ALKAL2Q6UX46 152 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 DAZ4Q86SG3 579 aaKnown RBP11.51□□□□□ -0.57
MSH6-203ENST00000420813 FMC1Q96HJ9 113 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 DAZ3Q9NR90 486 aaKnown RBP11.51□□□□□ -0.57
MSH6-203ENST00000420813 Q9UF83 564 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
MSH6-203ENST00000420813 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 MAP1LC3B2A6NCE7 125 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 M0R036 132 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 SH2D1AO60880 128 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 WFDC2Q14508 124 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 CLLU1Q5K131 121 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 MAP1LC3BQ9GZQ8 125 aa11.5□□□□□ -0.57
MSH6-203ENST00000420813 SEC11BP0C7V7 166 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 FHITP49789 147 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 UBE2G1P62253 170 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 ZNF674Q2M3X9 581 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 Q6ZSA8 131 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 FAM30AQ9NZY2 134 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 PHLDA3Q9Y5J5 127 aa11.49□□□□□ -0.57
MSH6-203ENST00000420813 GRIFINA4D1Z8 144 aa11.48□□□□□ -0.57
MSH6-203ENST00000420813 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
MSH6-203ENST00000420813 RMI2Q96E14 147 aa11.48□□□□□ -0.57
MSH6-203ENST00000420813 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
MSH6-203ENST00000420813 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
MSH6-203ENST00000420813 LTAP01374 205 aa11.47□□□□□ -0.57
MSH6-203ENST00000420813 NIT1Q86X76 327 aa11.47□□□□□ -0.57
MSH6-203ENST00000420813 ZFP82Q8N141 532 aa11.47□□□□□ -0.57
MSH6-203ENST00000420813 CHCHD7Q9BUK0 85 aa11.47□□□□□ -0.57
MSH6-203ENST00000420813 ATP6V1G1O75348 118 aa11.46□□□□□ -0.57
MSH6-203ENST00000420813 A0A087WWL8 130 aa11.45□□□□□ -0.58
MSH6-203ENST00000420813 M0R381 172 aa11.45□□□□□ -0.58
MSH6-203ENST00000420813 LECT2O14960 151 aa11.45□□□□□ -0.58
MSH6-203ENST00000420813 CST9LP1Q5W188 147 aa11.45□□□□□ -0.58
MSH6-203ENST00000420813 AKR1C3P42330 323 aa11.44□□□□□ -0.58
MSH6-203ENST00000420813 RPL36AP83881 106 aaKnown RBP11.44□□□□□ -0.58
MSH6-203ENST00000420813 ELOBQ15370 118 aa11.44□□□□□ -0.58
MSH6-203ENST00000420813 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
MSH6-203ENST00000420813 RPL36ALQ969Q0 106 aaKnown RBP11.44□□□□□ -0.58
MSH6-203ENST00000420813 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.43□□□□□ -0.58
MSH6-203ENST00000420813 A0A087WX48 190 aa11.43□□□□□ -0.58
MSH6-203ENST00000420813 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
MSH6-203ENST00000420813 UBE2D3P61077 147 aa11.43□□□□□ -0.58
MSH6-203ENST00000420813 UBE2D2P62837 147 aa11.43□□□□□ -0.58
MSH6-203ENST00000420813 Q8N976 141 aa11.43□□□□□ -0.58
MSH6-203ENST00000420813 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
MSH6-203ENST00000420813 TRBV7-3A0A075B6L6 115 aa11.42□□□□□ -0.58
MSH6-203ENST00000420813 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
MSH6-203ENST00000420813 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
MSH6-203ENST00000420813 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
MSH6-203ENST00000420813 S100A9P06702 114 aaKnown RBP11.42□□□□□ -0.58
MSH6-203ENST00000420813 CXCL1P09341 107 aa11.42□□□□□ -0.58
MSH6-203ENST00000420813 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
MSH6-203ENST00000420813 OR10G8Q8NGN5 311 aa11.42□□□□□ -0.58
MSH6-203ENST00000420813 PAGE4O60829 102 aa11.41□□□□□ -0.58
MSH6-203ENST00000420813 SULT1A2P50226 295 aa11.41□□□□□ -0.58
MSH6-203ENST00000420813 KCNIP4Q6PIL6 250 aa11.41□□□□□ -0.58
MSH6-203ENST00000420813 RAB5CP51148 216 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 RAB4BP61018 213 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 Q0VG73 95 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 MBD3L1Q8WWY6 194 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 UBE2WQ96B02 151 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 MED9Q9NWA0 146 aa11.4□□□□□ -0.58
MSH6-203ENST00000420813 RBFOX3A6NFN3 312 aa11.39□□□□□ -0.59
MSH6-203ENST00000420813 UMAD1C9J7I0 102 aa11.39□□□□□ -0.59
MSH6-203ENST00000420813 COMMD7Q86VX2 200 aa11.39□□□□□ -0.59
MSH6-203ENST00000420813 MLST8Q9BVC4 326 aa11.39□□□□□ -0.59
MSH6-203ENST00000420813 BLOC1S1P78537 153 aa11.38□□□□□ -0.59
MSH6-203ENST00000420813 PRR27Q6MZM9 219 aa11.38□□□□□ -0.59
MSH6-203ENST00000420813 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
MSH6-203ENST00000420813 SFT2D1Q8WV19 159 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms