RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
TRIM39-206ENST00000420746 GFRA4Q9GZZ7 299 aa5.35□□□□□ -1.55
TRIM39-206ENST00000420746 MCUBQ9NWR8 336 aa5.35□□□□□ -1.55
TRIM39-206ENST00000420746 GVQW2A0A096LPI5 108 aaPredicted RBP5.34□□□□□ -1.55
TRIM39-206ENST00000420746 C7orf66A4D0T2 115 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 S100A4P26447 101 aaKnown RBP5.34□□□□□ -1.55
TRIM39-206ENST00000420746 RAB2AP61019 212 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 PPP1R1AQ13522 171 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 FAM162BQ5T6X4 162 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 FAM74A4Q5TZK3 123 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 NMES1Q9C002 83 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 IL36BQ9NZH7 164 aa5.34□□□□□ -1.55
TRIM39-206ENST00000420746 TSPAN13O95857 204 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 ZNF80P51504 273 aaPredicted RBP5.33□□□□□ -1.56
TRIM39-206ENST00000420746 BAXQ07812 192 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 GCSAMLQ5JQS6 135 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 FAM74A1Q5RGS3 127 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 NTM-AS1Q6ZSK4 140 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 C20orf203Q8NBC4 194 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 CMTM2Q8TAZ6 248 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 SFRP2Q96HF1 295 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 OTORQ9NRC9 128 aa5.33□□□□□ -1.56
TRIM39-206ENST00000420746 TRBV25-1A0A075B6N4 114 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 UBE2L5PA0A1B0GUS4 154 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 A0A1B0GUV1 79 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 GCGP01275 180 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 PTTG1IPP53801 180 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 NCS1P62166 190 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 GAGE6Q13070 117 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 IQCJQ1A5X6 159 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 HIGD2BQ4VC39 106 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 SPANXN2Q5MJ10 180 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 GOLT1AQ6ZVE7 132 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 BCL7BQ9BQE9 202 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 SLC25A21Q9BQT8 299 aaPredicted RBP5.32□□□□□ -1.56
TRIM39-206ENST00000420746 NPCDR1Q9BY65 106 aa5.32□□□□□ -1.56
TRIM39-206ENST00000420746 SERTM2A0A1B0GWG4 89 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 OR7C2O60412 319 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 SCGB1D2O95969 90 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 FGF7P21781 194 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 S100A11P31949 105 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 FAUP35544 74 aaKnown RBP5.31□□□□□ -1.56
TRIM39-206ENST00000420746 AMTP48728 403 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
TRIM39-206ENST00000420746 NEXN-AS1Q8NBZ9 246 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 OR11H4Q8NGC9 324 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 HYLS1Q96M11 299 aa5.31□□□□□ -1.56
TRIM39-206ENST00000420746 CST7O76096 145 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 MBPP02686 304 aaPredicted RBP5.3□□□□□ -1.56
TRIM39-206ENST00000420746 RAB5CP51148 216 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 RAB4BP61018 213 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 CYCSP99999 105 aaKnown RBP5.3□□□□□ -1.56
TRIM39-206ENST00000420746 ZFP69Q49AA0 526 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 SMUG1Q53HV7 270 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 DNLZQ5SXM8 178 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 PRR27Q6MZM9 219 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 PHLDA3Q9Y5J5 127 aa5.3□□□□□ -1.56
TRIM39-206ENST00000420746 IGKV3D-20A0A0C4DH25 116 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 TRBV6-1A0A0K0K1D8 114 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 L7N2F9 121 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 VBP1P61758 197 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 VAMP2P63027 116 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 EIF5AP63241 154 aaKnown RBP5.29□□□□□ -1.56
TRIM39-206ENST00000420746 ATP6V1FQ16864 119 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 ZNF674Q2M3X9 581 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 IAH1Q2TAA2 248 aaPredicted RBP5.29□□□□□ -1.56
TRIM39-206ENST00000420746 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 CARD19Q96LW7 228 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 DERL1Q9BUN8 251 aa5.29□□□□□ -1.56
TRIM39-206ENST00000420746 RPP21Q9H633 154 aaKnown RBP5.29□□□□□ -1.56
TRIM39-206ENST00000420746 IGHV1-24A0A0C4DH33 117 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 C9orf170A2RU37 121 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 H3BVH4 76 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 EIF3GO75821 320 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRIM39-206ENST00000420746 SULT1A1P50225 295 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 BCAP31P51572 246 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 HBG1P69891 147 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 HBG2P69892 147 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 IL18Q14116 193 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 CTF1Q16619 201 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 KHDC3LQ587J8 217 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 MCFD2Q8NI22 146 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 TSKUQ8WUA8 353 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 AQP10Q96PS8 301 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 MRPS26Q9BYN8 205 aaKnown RBP5.28□□□□□ -1.56
TRIM39-206ENST00000420746 KCNIP2Q9NS61 270 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 GSKIPQ9P0R6 139 aa5.28□□□□□ -1.56
TRIM39-206ENST00000420746 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 ARMS2P0C7Q2 107 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 SULT1A2P50226 295 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 TAS2R45P59539 299 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 C9orf116Q5BN46 136 aaPredicted RBP5.27□□□□□ -1.57
TRIM39-206ENST00000420746 OR5C1Q8NGR4 320 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 DEDD2Q8WXF8 326 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 MED28Q9H204 178 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 Q9H521 79 aa5.27□□□□□ -1.57
TRIM39-206ENST00000420746 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms