RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 TM4SF20Q53R12 229 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 SELENOKQ9Y6D0 94 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 NOTCH3Q9UM47 2321 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 ADARB2-AS1A8MUL3 147 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 PRSS1P07477 247 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 C4orf3Q8WVX3 66 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 PRR25Q96S07 402 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 EDN2P20800 178 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 SLURP1P55000 103 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 TCTAP57738 103 aa9.72□□□□□ -0.85
LINC00642-201ENST00000419459 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 IGHV3-49A0A0A0MS15 119 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 A0A1B0GWB2 263 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 PRSS47A8MTI9 375 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 M0R3E3 92 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 HOXD3P31249 432 aaPredicted RBP9.71□□□□□ -0.86
LINC00642-201ENST00000419459 FXYD7P58549 80 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 RNF185Q96GF1 192 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 RAX2Q96IS3 184 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
LINC00642-201ENST00000419459 TMSB15BA0A087X1C1 80 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 K7ERJ3 54 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 TNFRSF6BO95407 300 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 WFDC2Q14508 124 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 C12orf74Q32Q52 190 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 GAGE13Q4V321 117 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 ZC2HC1BQ5TFG8 222 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 Q8N8P6 123 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 IGHV3-66A0A0C4DH42 116 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 SMKR1H3BMG3 65 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 RPL7P18124 248 aaKnown RBP9.7□□□□□ -0.86
LINC00642-201ENST00000419459 SYNJ2BPP57105 145 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 SPAG8Q99932 426 aaPredicted RBP9.7□□□□□ -0.86
LINC00642-201ENST00000419459 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
LINC00642-201ENST00000419459 PLNP26678 52 aa9.69□□□□□ -0.86
LINC00642-201ENST00000419459 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
LINC00642-201ENST00000419459 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
LINC00642-201ENST00000419459 CITED1Q99966 193 aa9.69□□□□□ -0.86
LINC00642-201ENST00000419459 TMEM158Q8WZ71 300 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 ASCL2Q99929 193 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 CCL24O00175 119 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 CKS1BP61024 79 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 MDFIQ99750 246 aa9.68□□□□□ -0.86
LINC00642-201ENST00000419459 A0A087WX48 190 aa9.67□□□□□ -0.86
LINC00642-201ENST00000419459 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
LINC00642-201ENST00000419459 H3BMG7 143 aa9.67□□□□□ -0.86
LINC00642-201ENST00000419459 ETDBQ3ZM63 59 aa9.67□□□□□ -0.86
LINC00642-201ENST00000419459 WFDC3Q8IUB2 231 aa9.67□□□□□ -0.86
LINC00642-201ENST00000419459 DLX4Q92988 240 aaPredicted RBP9.67□□□□□ -0.86
LINC00642-201ENST00000419459 CMYA5Q8N3K9 4069 aa9.67□□□□□ -0.86
LINC00642-201ENST00000419459 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 NDUFA11Q86Y39 141 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 C3orf56Q8N813 242 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 SPATA3Q8NHX4 192 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 MRPL16Q9NX20 251 aaKnown RBP9.66□□□□□ -0.86
LINC00642-201ENST00000419459 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 TRAV12-1A0A0B4J245 112 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.66□□□□□ -0.86
LINC00642-201ENST00000419459 NDUFA4O00483 81 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 TTTY13Q9BZ97 58 aa9.66□□□□□ -0.86
LINC00642-201ENST00000419459 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
LINC00642-201ENST00000419459 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
LINC00642-201ENST00000419459 FHL3Q13643 280 aa9.65□□□□□ -0.86
LINC00642-201ENST00000419459 LAGE3Q14657 143 aa9.65□□□□□ -0.86
LINC00642-201ENST00000419459 VCX2Q9H322 139 aa9.65□□□□□ -0.86
LINC00642-201ENST00000419459 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.86
LINC00642-201ENST00000419459 ZNF575Q86XF7 245 aa9.65□□□□□ -0.87
LINC00642-201ENST00000419459 GPHB5Q86YW7 130 aa9.65□□□□□ -0.87
LINC00642-201ENST00000419459 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.87
LINC00642-201ENST00000419459 DAZ1Q9NQZ3 744 aaKnown RBP9.65□□□□□ -0.87
LINC00642-201ENST00000419459 SORL1Q92673 2214 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 A6NJY4 79 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 ORM1P02763 201 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 ZNF80P51504 273 aaPredicted RBP9.64□□□□□ -0.87
LINC00642-201ENST00000419459 LYRM7Q5U5X0 104 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 SH2D6Q7Z4S9 175 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 CYSLTR1Q9Y271 337 aa9.64□□□□□ -0.87
LINC00642-201ENST00000419459 APOMO95445 188 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 MAPKAPK5-AS1Q8N8E1 139 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 METTL26Q96S19 204 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 F8VRH5 84 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 H7C1H1 209 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 K7EMI3 77 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 PF4P02776 101 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 FOXI1Q12951 378 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
LINC00642-201ENST00000419459 IGKV3-7A0A075B6H7 116 aa9.62□□□□□ -0.87
LINC00642-201ENST00000419459 MYMXA0A1B0GTQ4 84 aa9.62□□□□□ -0.87
LINC00642-201ENST00000419459 OR11H12B2RN74 326 aa9.62□□□□□ -0.87
LINC00642-201ENST00000419459 OR11H2Q8NH07 326 aa9.62□□□□□ -0.87
LINC00642-201ENST00000419459 CLUHP3Q96NS8 147 aa9.62□□□□□ -0.87
LINC00642-201ENST00000419459 BUB3O43684 328 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms