RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.42
USP54-203ENST00000418501 TRGV2A0A075B6R0 118 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 SMKR1H3BMG3 65 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 I3L3M4 83 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 HNRNPA3P51991 378 aaKnown RBP6.2□□□□□ -1.42
USP54-203ENST00000418501 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 ADAMTSL5Q6ZMM2 481 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 BOD1L1Q8NFC6 3051 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 EDN2P20800 178 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 DEFB1P60022 68 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 SPATA12Q7Z6I5 190 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 KIR2DL5BQ8NHK3 375 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 PRADC1Q9BSG0 188 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 TRGV1A0A0A0MS02 117 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 AZU1P20160 251 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 DGAT2L7PQ6IED9 249 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 TEX43Q6ZNM6 134 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 MIEN1Q9BRT3 115 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 ABCA12Q86UK0 2595 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 TRBV6-5A0A0K0K1A5 114 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 CCL25O15444 150 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 PAM16Q9Y3D7 125 aa6.2□□□□□ -1.42
USP54-203ENST00000418501 ZNF747Q9BV97 191 aa6.19□□□□□ -1.42
USP54-203ENST00000418501 A0A087WWL8 130 aa6.19□□□□□ -1.42
USP54-203ENST00000418501 PLNP26678 52 aa6.19□□□□□ -1.42
USP54-203ENST00000418501 ZFHX4Q86UP3 3567 aa6.19□□□□□ -1.42
USP54-203ENST00000418501 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
USP54-203ENST00000418501 DPM2O94777 84 aa6.19□□□□□ -1.42
USP54-203ENST00000418501 POLQO75417 2590 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 TRBV10-1A0A0K0K1A3 114 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 NUPR1O60356 82 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 SUMO4Q6EEV6 95 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 SLC25A34Q6PIV7 304 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 MDFICQ9P1T7 246 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 CITED1Q99966 193 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 TRGV4A0A0C4DH28 118 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
USP54-203ENST00000418501 TRAV4A0A0B4J268 109 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 ORAOV1Q8WV07 137 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 LINC01546A6NGU7 62 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 CRXO43186 299 aaPredicted RBP6.17□□□□□ -1.42
USP54-203ENST00000418501 ERASQ7Z444 233 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 EDA2RQ9HAV5 297 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 CELSR3Q9NYQ7 3312 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 UBE2L6O14933 153 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 RS1O15537 224 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 IGKCP01834 107 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 DAZ2Q13117 558 aaKnown RBP6.17□□□□□ -1.42
USP54-203ENST00000418501 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
USP54-203ENST00000418501 GCSHP23434 173 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 LINC01545Q5VT33 79 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 RELNP78509 3460 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 TRAV12-1A0A0B4J245 112 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 TRAV26-2A0A0B4J265 109 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 COL5A1-AS1Q5SY13 56 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 NRACQ8N912 160 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 RASL10AQ92737 203 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 TMEM101Q96IK0 257 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 C18orf15Q96N68 181 aa6.16□□□□□ -1.42
USP54-203ENST00000418501 LINC00310P59036 64 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 SEC11AP67812 179 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 TOMM6Q96B49 74 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 FLNCQ14315 2725 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 NBPF19A0A087WUL8 3843 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 KMT2BQ9UMN6 2715 aaPredicted RBP6.15□□□□□ -1.42
USP54-203ENST00000418501 KIR3DS1Q14943 382 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 TIMM17AQ99595 171 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 VCX2Q9H322 139 aa6.15□□□□□ -1.42
USP54-203ENST00000418501 ADARB2-AS1A8MUL3 147 aa6.15□□□□□ -1.43
USP54-203ENST00000418501 CRYBA4P53673 196 aa6.15□□□□□ -1.43
USP54-203ENST00000418501 AMMECR1LQ6DCA0 310 aa6.15□□□□□ -1.43
USP54-203ENST00000418501 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.43
USP54-203ENST00000418501 Q8N976 141 aa6.15□□□□□ -1.43
USP54-203ENST00000418501 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.43
USP54-203ENST00000418501 DCHS1Q96JQ0 3298 aa6.15□□□□□ -1.43
USP54-203ENST00000418501 LYRM9A8MSI8 78 aa6.15□□□□□ -1.43
USP54-203ENST00000418501 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.43
USP54-203ENST00000418501 HRNRQ86YZ3 2850 aaPredicted RBP6.15□□□□□ -1.43
USP54-203ENST00000418501 IGHV3-53P01767 116 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 STPG4Q8N801 248 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 WFDC9Q8NEX5 89 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 SH2D6Q7Z4S9 175 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 SPANXA1Q9NS26 97 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 K7EQD1 137 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 M0QY20 66 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 CRYGDP07320 174 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 PMVKQ15126 192 aa6.14□□□□□ -1.43
USP54-203ENST00000418501 A0A087WX48 190 aa6.13□□□□□ -1.43
USP54-203ENST00000418501 GATA1P15976 413 aaPredicted RBP6.13□□□□□ -1.43
USP54-203ENST00000418501 OR11H2Q8NH07 326 aa6.13□□□□□ -1.43
USP54-203ENST00000418501 RPL39LQ96EH5 51 aaKnown RBP6.13□□□□□ -1.43
USP54-203ENST00000418501 NOP10Q9NPE3 64 aaKnown RBP6.13□□□□□ -1.43
USP54-203ENST00000418501 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
USP54-203ENST00000418501 F8VRH5 84 aa6.13□□□□□ -1.43
USP54-203ENST00000418501 H3BRM9 83 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms