RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 C19orf54Q5BKX5 351 aa8.93□□□□□ -0.98
LIMK1-202ENST00000418310 TMEM170BQ5T4T1 132 aa8.93□□□□□ -0.98
LIMK1-202ENST00000418310 MDFICQ9P1T7 246 aa8.93□□□□□ -0.98
LIMK1-202ENST00000418310 ETDBQ3ZM63 59 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 C10orf105Q8TEF2 133 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 HIGD1BQ9P298 99 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 MSMBP08118 114 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 PHLDA1Q8WV24 401 aaPredicted RBP8.92□□□□□ -0.98
LIMK1-202ENST00000418310 IGHV4-4A0A075B6R2 117 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 NEXN-AS1Q8NBZ9 246 aa8.92□□□□□ -0.98
LIMK1-202ENST00000418310 LOC107984156A0A0G2JMH3 177 aa8.91□□□□□ -0.98
LIMK1-202ENST00000418310 A6NDX4 124 aa8.91□□□□□ -0.98
LIMK1-202ENST00000418310 LGALS1P09382 135 aaKnown RBP8.91□□□□□ -0.98
LIMK1-202ENST00000418310 SYNJ2BPP57105 145 aa8.91□□□□□ -0.98
LIMK1-202ENST00000418310 ARL17AQ8IVW1 177 aa8.91□□□□□ -0.98
LIMK1-202ENST00000418310 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
LIMK1-202ENST00000418310 FBN2P35556 2912 aa8.91□□□□□ -0.98
LIMK1-202ENST00000418310 USMG5Q96IX5 58 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 G3V4G9 280 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 DEFB112Q30KQ8 113 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 TM2D2Q9BX73 214 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 TEX15Q9BXT5 2789 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 JMJD1CQ15652 2540 aa8.9□□□□□ -0.98
LIMK1-202ENST00000418310 GTSF1LQ9H1H1 148 aa8.9□□□□□ -0.99
LIMK1-202ENST00000418310 MRPL16Q9NX20 251 aaKnown RBP8.9□□□□□ -0.99
LIMK1-202ENST00000418310 LENEPQ9Y5L5 61 aa8.9□□□□□ -0.99
LIMK1-202ENST00000418310 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
LIMK1-202ENST00000418310 DUX3Q96PT4 197 aa8.89□□□□□ -0.99
LIMK1-202ENST00000418310 LINC01549A6NIU2 74 aa8.89□□□□□ -0.99
LIMK1-202ENST00000418310 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
LIMK1-202ENST00000418310 Q5PR19 223 aa8.89□□□□□ -0.99
LIMK1-202ENST00000418310 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
LIMK1-202ENST00000418310 PRRC2AP48634 2157 aaKnown RBP8.88□□□□□ -0.99
LIMK1-202ENST00000418310 KNCNA6PVL3 124 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 TSHBP01222 138 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 KHDC1LQ5JSQ8 128 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 KIR2DL4Q99706 377 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 H7C2G1 150 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 CRYGDP07320 174 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 ID1P41134 155 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 INSL3P51460 131 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 KLK9Q2XQG4 91 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
LIMK1-202ENST00000418310 Q8N1Y9 231 aa8.88□□□□□ -0.99
LIMK1-202ENST00000418310 ZNF418Q8TF45 676 aaPredicted RBP8.88□□□□□ -0.99
LIMK1-202ENST00000418310 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 DCANP1Q8TF63 244 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 NF1P21359 2839 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 E9PLD3 99 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 FOXI2Q6ZQN5 318 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 P0DMU3 169 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 FAM231AP0DMU4 169 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 FAM231CP0DMU5 169 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 LINC00315P59091 139 aa8.87□□□□□ -0.99
LIMK1-202ENST00000418310 HOXA3O43365 443 aaPredicted RBP8.86□□□□□ -0.99
LIMK1-202ENST00000418310 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 TSSC4Q9Y5U2 329 aaPredicted RBP8.86□□□□□ -0.99
LIMK1-202ENST00000418310 CHD6Q8TD26 2715 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 RRN3P1Q2M238 152 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 PSMB2P49721 201 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 PROK1P58294 105 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 BEX4Q9NWD9 120 aaPredicted RBP8.86□□□□□ -0.99
LIMK1-202ENST00000418310 KIF25-AS1Q9Y6Z4 181 aa8.86□□□□□ -0.99
LIMK1-202ENST00000418310 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 IGLV1-40P01703 118 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 PRB1P04280 392 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 ZNF876PQ49A33 203 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 C18orf65Q6ZTR6 163 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 ZNF580Q9UK33 172 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 KLLNB2CW77 178 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 CIDEAO60543 219 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 CRIP2P52943 208 aaPredicted RBP8.85□□□□□ -0.99
LIMK1-202ENST00000418310 PRORYQ9H606 182 aa8.85□□□□□ -0.99
LIMK1-202ENST00000418310 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 CEMP1Q6PRD7 247 aaPredicted RBP8.84□□□□□ -0.99
LIMK1-202ENST00000418310 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 PTH2Q96A98 100 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 MTORP42345 2549 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 A0A087WW49 117 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 B4DSR2 109 aa8.84□□□□□ -0.99
LIMK1-202ENST00000418310 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
LIMK1-202ENST00000418310 MORN3Q6PF18 240 aaPredicted RBP8.84□□□□□ -0.99
LIMK1-202ENST00000418310 VCYO14598 125 aa8.83□□□□□ -1
LIMK1-202ENST00000418310 PMVKQ15126 192 aa8.83□□□□□ -1
LIMK1-202ENST00000418310 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms