RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FRZBQ92765 325 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 DAZAP1Q96EP5 407 aaKnown RBP12.33□□□□□ -0.44
VCP-202ENST00000417448 SAMD10Q9BYL1 202 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 RNASE7Q9H1E1 156 aaKnown RBP12.33□□□□□ -0.44
VCP-202ENST00000417448 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 M0R381 172 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 CRYBA4P53673 196 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 NUDT10Q8NFP7 164 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 NUDT11Q96G61 164 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 PHLDA3Q9Y5J5 127 aa12.32□□□□□ -0.44
VCP-202ENST00000417448 Q6ZSN1 163 aa12.31□□□□□ -0.44
VCP-202ENST00000417448 OR10AG1Q8NH19 301 aa12.31□□□□□ -0.44
VCP-202ENST00000417448 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
VCP-202ENST00000417448 Q9H8V8 135 aa12.31□□□□□ -0.44
VCP-202ENST00000417448 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
VCP-202ENST00000417448 PRO0255Q9UI72 69 aa12.3□□□□□ -0.44
VCP-202ENST00000417448 A0A087WWL8 130 aa12.29□□□□□ -0.44
VCP-202ENST00000417448 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
VCP-202ENST00000417448 P01737 135 aa12.29□□□□□ -0.44
VCP-202ENST00000417448 PTH2Q96A98 100 aa12.29□□□□□ -0.44
VCP-202ENST00000417448 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
VCP-202ENST00000417448 GYPEP15421 78 aa12.28□□□□□ -0.44
VCP-202ENST00000417448 GATA1P15976 413 aaPredicted RBP12.28□□□□□ -0.44
VCP-202ENST00000417448 ESRGQ1W209 222 aa12.28□□□□□ -0.44
VCP-202ENST00000417448 SMIM12Q96EX1 92 aa12.28□□□□□ -0.44
VCP-202ENST00000417448 PEA15Q15121 130 aa12.27□□□□□ -0.45
VCP-202ENST00000417448 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
VCP-202ENST00000417448 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
VCP-202ENST00000417448 Q9UF83 564 aa12.27□□□□□ -0.45
VCP-202ENST00000417448 HMCN2Q8NDA2 5059 aa12.27□□□□□ -0.45
VCP-202ENST00000417448 RAB14P61106 215 aa12.26□□□□□ -0.45
VCP-202ENST00000417448 TTC32Q5I0X7 151 aa12.26□□□□□ -0.45
VCP-202ENST00000417448 SLC25A29Q8N8R3 303 aa12.26□□□□□ -0.45
VCP-202ENST00000417448 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
VCP-202ENST00000417448 A8MWV9 139 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 H3BNG1 76 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 J3QL48 77 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 K7EQD1 137 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 SNAI2O43623 268 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 CXCL1P09341 107 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 SLAQ13239 276 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 Q6ZRN7 208 aaPredicted RBP12.25□□□□□ -0.45
VCP-202ENST00000417448 ZFP82Q8N141 532 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
VCP-202ENST00000417448 SFRP2Q96HF1 295 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
VCP-202ENST00000417448 BIN3Q9NQY0 253 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 MSRB1Q9NZV6 116 aa12.25□□□□□ -0.45
VCP-202ENST00000417448 GATCO43716 136 aaKnown RBP12.24□□□□□ -0.45
VCP-202ENST00000417448 CRYGDP07320 174 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 IGLC6P0CF74 106 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 KRTAP10-1P60331 282 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
VCP-202ENST00000417448 SPANXN1Q5VSR9 72 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
VCP-202ENST00000417448 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
VCP-202ENST00000417448 OR5AL1P0C617 328 aa12.23□□□□□ -0.45
VCP-202ENST00000417448 PGPEP1Q9NXJ5 209 aa12.23□□□□□ -0.45
VCP-202ENST00000417448 A0A1W2PPQ1 181 aa12.22□□□□□ -0.45
VCP-202ENST00000417448 NDUFS6O75380 124 aaKnown RBP12.22□□□□□ -0.45
VCP-202ENST00000417448 LINC00315P59091 139 aa12.22□□□□□ -0.45
VCP-202ENST00000417448 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
VCP-202ENST00000417448 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
VCP-202ENST00000417448 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
VCP-202ENST00000417448 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
VCP-202ENST00000417448 NXPH4O95158 308 aa12.21□□□□□ -0.45
VCP-202ENST00000417448 SRIP30626 198 aa12.21□□□□□ -0.45
VCP-202ENST00000417448 RPL23P62829 140 aaKnown RBP12.21□□□□□ -0.45
VCP-202ENST00000417448 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.45
VCP-202ENST00000417448 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
VCP-202ENST00000417448 LY96Q9Y6Y9 160 aa12.21□□□□□ -0.45
VCP-202ENST00000417448 ADIRFQ15847 76 aa12.2□□□□□ -0.46
VCP-202ENST00000417448 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
VCP-202ENST00000417448 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
VCP-202ENST00000417448 ZFP2Q6ZN57 461 aa12.2□□□□□ -0.46
VCP-202ENST00000417448 GTSF1Q8WW33 167 aa12.2□□□□□ -0.46
VCP-202ENST00000417448 TRBV6-4A0A1B0GX49 114 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 XKRY2A2RUG3 117 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 GAGE12JA6NER3 117 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 HAMPP81172 84 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 GAGE1Q13065 139 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 GAGE4Q13068 117 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 GAGE5Q13069 117 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 GAGE13Q4V321 117 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 FAM231DQ6ZW35 169 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 PRADC1Q9BSG0 188 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 NAT8Q9UHE5 227 aa12.19□□□□□ -0.46
VCP-202ENST00000417448 CIDEAO60543 219 aa12.18□□□□□ -0.46
VCP-202ENST00000417448 RHOHQ15669 191 aa12.18□□□□□ -0.46
VCP-202ENST00000417448 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
VCP-202ENST00000417448 ISOC2Q96AB3 205 aa12.18□□□□□ -0.46
VCP-202ENST00000417448 PGLYRP4Q96LB8 373 aa12.18□□□□□ -0.46
VCP-202ENST00000417448 NTF3P20783 257 aa12.17□□□□□ -0.46
VCP-202ENST00000417448 ZNF56Q15929 161 aa12.17□□□□□ -0.46
VCP-202ENST00000417448 SMDT1Q9H4I9 107 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms