RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 UBL5Q9BZL1 73 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 IGHV1-69DA0A0B4J2H0 117 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 IGHV1-69P01742 117 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 LINC00311Q8N616 119 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 RBX1P62877 108 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 SEM1Q6ZVN7 128 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 NCKAP5O14513 1909 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.05□□□□□ -0.8
SCN1B-202ENST00000415950 IGKV2-29A2NJV5 120 aaPredicted RBP10.05□□□□□ -0.8
SCN1B-202ENST00000415950 IGLL5B9A064 214 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 F8WEM9 126 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 PTH2Q96A98 100 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 VCANP13611 3396 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 CRLF1O75462 422 aa10.05□□□□□ -0.8
SCN1B-202ENST00000415950 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
SCN1B-202ENST00000415950 ANKRD29Q8N6D5 301 aa10.04□□□□□ -0.8
SCN1B-202ENST00000415950 TAL2Q16559 108 aa10.04□□□□□ -0.8
SCN1B-202ENST00000415950 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
SCN1B-202ENST00000415950 MBD6Q96DN6 1003 aa10.04□□□□□ -0.8
SCN1B-202ENST00000415950 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 SIVA1O15304 175 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 NCOR1P1Q9H4R4 102 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 CHD9Q3L8U1 2897 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 F8P00451 2351 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 I3L2K1 104 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 NDUFA4O00483 81 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 HOXD3P31249 432 aaPredicted RBP10.03□□□□□ -0.8
SCN1B-202ENST00000415950 MAP1AP78559 2803 aaPredicted RBP10.03□□□□□ -0.8
SCN1B-202ENST00000415950 CRYGCP07315 174 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 Q8N7P7 452 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 Q9H8V8 135 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 NUP210LQ5VU65 1888 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
SCN1B-202ENST00000415950 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
SCN1B-202ENST00000415950 TMEM126AQ9H061 195 aa10.02□□□□□ -0.81
SCN1B-202ENST00000415950 LTBP2Q14767 1821 aa10.02□□□□□ -0.81
SCN1B-202ENST00000415950 RBAKDNA6NC62 111 aa10.02□□□□□ -0.81
SCN1B-202ENST00000415950 PSCAO43653 123 aa10.02□□□□□ -0.81
SCN1B-202ENST00000415950 DSCR9P59020 149 aa10.02□□□□□ -0.81
SCN1B-202ENST00000415950 SPEGQ15772 3267 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 A4D1N5 150 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 A0A1B0GXF2 115 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 C5orf38Q86SI9 138 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 UBE2DNLQ8IWF7 75 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 DAND5Q8N907 189 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 MRAPQ8TCY5 172 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 DSCAMO60469 2012 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 XCL1P47992 114 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 ZNF80P51504 273 aaPredicted RBP10.01□□□□□ -0.81
SCN1B-202ENST00000415950 LINC01356Q8N9X3 169 aa10.01□□□□□ -0.81
SCN1B-202ENST00000415950 IGLV2-23P01705 113 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 BAALC-AS2P0C853 105 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 EIF4EBP1Q13541 118 aaPredicted RBP10□□□□□ -0.81
SCN1B-202ENST00000415950 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 PRSS47A8MTI9 375 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 ANGP03950 147 aaKnown RBP10□□□□□ -0.81
SCN1B-202ENST00000415950 CGB3P0DN86 165 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 CGB7P0DN87 165 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 DEFB136Q30KP8 78 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 IGHV7-4-1A0A0J9YVY3 117 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 CTSGP08311 255 aa10□□□□□ -0.81
SCN1B-202ENST00000415950 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
SCN1B-202ENST00000415950 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
SCN1B-202ENST00000415950 CR1LQ2VPA4 569 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 FOXI2Q6ZQN5 318 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 TRACP01848 142 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 DAD1P61803 113 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 IGHG4P01861 327 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 RPL32P62910 135 aaKnown RBP9.99□□□□□ -0.81
SCN1B-202ENST00000415950 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
SCN1B-202ENST00000415950 Q71RC1 249 aaPredicted RBP9.98□□□□□ -0.81
SCN1B-202ENST00000415950 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
SCN1B-202ENST00000415950 IGHV4-4A0A075B6R2 117 aa9.98□□□□□ -0.81
SCN1B-202ENST00000415950 LINC01619G3V211 115 aa9.98□□□□□ -0.81
SCN1B-202ENST00000415950 RBM3P98179 157 aaKnown RBP9.98□□□□□ -0.81
SCN1B-202ENST00000415950 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
SCN1B-202ENST00000415950 MRPL53Q96EL3 112 aaKnown RBP9.98□□□□□ -0.81
SCN1B-202ENST00000415950 U3KQE9 123 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 AGRNO00468 2067 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 SPRY4Q9C004 299 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 A0A0J9YY99 117 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 ODF1Q14990 250 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 NOP10Q9NPE3 64 aaKnown RBP9.97□□□□□ -0.81
SCN1B-202ENST00000415950 KAAG1Q9UBP8 84 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 LAMA1P25391 3075 aa9.97□□□□□ -0.81
SCN1B-202ENST00000415950 SHISA9B4DS77 424 aa9.96□□□□□ -0.81
SCN1B-202ENST00000415950 BLCAPP62952 87 aa9.96□□□□□ -0.81
SCN1B-202ENST00000415950 HERVK_113P63121 156 aa9.96□□□□□ -0.81
SCN1B-202ENST00000415950 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.82
SCN1B-202ENST00000415950 Q8N976 141 aa9.96□□□□□ -0.82
SCN1B-202ENST00000415950 DSCR8Q96T75 97 aa9.96□□□□□ -0.82
SCN1B-202ENST00000415950 CENPEQ02224 2701 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms