RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CSMD2Q7Z408 3487 aa11.17□□□□□ -0.62
TTC39A-208ENST00000413473 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 B4DSR2 109 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 H3BMG7 143 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 VCYO14598 125 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 RPL32P62910 135 aaKnown RBP11.16□□□□□ -0.62
TTC39A-208ENST00000413473 AMTNQ6UX39 209 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 UTP20O75691 2785 aaKnown RBP11.16□□□□□ -0.62
TTC39A-208ENST00000413473 PIEZO1Q92508 2521 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 IGHV4-59P01825 116 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 PLEKHB2Q96CS7 222 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 KIR2DL4Q99706 377 aa11.16□□□□□ -0.62
TTC39A-208ENST00000413473 A0A1B0GWB2 263 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 WFDC2Q14508 124 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 SAMD13Q5VXD3 122 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 MDFICQ9P1T7 246 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 ZANQ9Y493 2812 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 ACACBO00763 2458 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 CACNA1AO00555 2505 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 COX6B1P14854 86 aa11.15□□□□□ -0.62
TTC39A-208ENST00000413473 POLQO75417 2590 aa11.15□□□□□ -0.63
TTC39A-208ENST00000413473 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.63
TTC39A-208ENST00000413473 PMVKQ15126 192 aa11.14□□□□□ -0.63
TTC39A-208ENST00000413473 DEFB112Q30KQ8 113 aa11.14□□□□□ -0.63
TTC39A-208ENST00000413473 NRGNQ92686 78 aa11.14□□□□□ -0.63
TTC39A-208ENST00000413473 IGHV3-16A0A0C4DH30 117 aa11.14□□□□□ -0.63
TTC39A-208ENST00000413473 F8W1H4 67 aa11.14□□□□□ -0.63
TTC39A-208ENST00000413473 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
TTC39A-208ENST00000413473 CENPEQ02224 2701 aa11.13□□□□□ -0.63
TTC39A-208ENST00000413473 A0A0J9YX75 114 aa11.13□□□□□ -0.63
TTC39A-208ENST00000413473 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
TTC39A-208ENST00000413473 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
TTC39A-208ENST00000413473 LGALS9O00182 355 aa11.13□□□□□ -0.63
TTC39A-208ENST00000413473 SNRPD3P62318 126 aaKnown RBP11.13□□□□□ -0.63
TTC39A-208ENST00000413473 MORN3Q6PF18 240 aaPredicted RBP11.13□□□□□ -0.63
TTC39A-208ENST00000413473 Q8N1Y9 231 aa11.13□□□□□ -0.63
TTC39A-208ENST00000413473 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
TTC39A-208ENST00000413473 IGSF10Q6WRI0 2623 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 TMEM141Q96I45 108 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
TTC39A-208ENST00000413473 ANKRD17O75179 2603 aaKnown RBP11.11□□□□□ -0.63
TTC39A-208ENST00000413473 ZNF56Q15929 161 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 K7EQG2 157 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 HERVK_113P61574 105 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 SH2D6Q7Z4S9 175 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 SPANXB1Q9NS25 103 aaPredicted RBP11.11□□□□□ -0.63
TTC39A-208ENST00000413473 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
TTC39A-208ENST00000413473 M0QY20 66 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 GATA3P23771 443 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 ETDBQ3ZM63 59 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 GAGE13Q4V321 117 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 SYT8Q8NBV8 401 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 ZNRF2Q8NHG8 242 aa11.1□□□□□ -0.63
TTC39A-208ENST00000413473 MRPL16Q9NX20 251 aaKnown RBP11.09□□□□□ -0.63
TTC39A-208ENST00000413473 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
TTC39A-208ENST00000413473 A6NJY4 79 aa11.09□□□□□ -0.63
TTC39A-208ENST00000413473 ZNF876PQ49A33 203 aa11.09□□□□□ -0.63
TTC39A-208ENST00000413473 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-208ENST00000413473 A0A0J9YY99 117 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 UBE2D1P51668 147 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 PRO0461Q9UI25 63 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 MAPK1IP1LQ8NDC0 245 aa11.08□□□□□ -0.64
TTC39A-208ENST00000413473 TMEM89A2RUT3 159 aa11.07□□□□□ -0.64
TTC39A-208ENST00000413473 APOMO95445 188 aa11.07□□□□□ -0.64
TTC39A-208ENST00000413473 MYO9AB2RTY4 2548 aa11.07□□□□□ -0.64
TTC39A-208ENST00000413473 LINC01356Q8N9X3 169 aa11.07□□□□□ -0.64
TTC39A-208ENST00000413473 P0DMU3 169 aa11.06□□□□□ -0.64
TTC39A-208ENST00000413473 FAM231AP0DMU4 169 aa11.06□□□□□ -0.64
TTC39A-208ENST00000413473 FAM231CP0DMU5 169 aa11.06□□□□□ -0.64
TTC39A-208ENST00000413473 TRPT1Q86TN4 253 aaKnown RBP11.06□□□□□ -0.64
TTC39A-208ENST00000413473 TGFAP01135 160 aa11.06□□□□□ -0.64
TTC39A-208ENST00000413473 DSCR9P59020 149 aa11.06□□□□□ -0.64
TTC39A-208ENST00000413473 SPAG8Q99932 426 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-208ENST00000413473 LOC107984156A0A0G2JMH3 177 aa11.05□□□□□ -0.64
TTC39A-208ENST00000413473 TSPAN13O95857 204 aa11.05□□□□□ -0.64
TTC39A-208ENST00000413473 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-208ENST00000413473 RHOHQ15669 191 aa11.05□□□□□ -0.64
TTC39A-208ENST00000413473 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms