RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 BAALCQ8WXS3 180 aa12.66□□□□□ -0.38
CPSF7-204ENST00000413232 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
CPSF7-204ENST00000413232 TMSB15BA0A087X1C1 80 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 C1QBP02746 253 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 AKR1C8PQ5T2L2 129 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 NIT1Q86X76 327 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 SFRP2Q96HF1 295 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 ZFP30Q9Y2G7 519 aa12.65□□□□□ -0.38
CPSF7-204ENST00000413232 A0A087WWC5 75 aa12.64□□□□□ -0.39
CPSF7-204ENST00000413232 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
CPSF7-204ENST00000413232 FHITP49789 147 aa12.64□□□□□ -0.39
CPSF7-204ENST00000413232 OR11H4Q8NGC9 324 aa12.64□□□□□ -0.39
CPSF7-204ENST00000413232 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-204ENST00000413232 MAP1LC3BQ9GZQ8 125 aa12.64□□□□□ -0.39
CPSF7-204ENST00000413232 M0R381 172 aa12.63□□□□□ -0.39
CPSF7-204ENST00000413232 RHODO00212 210 aa12.63□□□□□ -0.39
CPSF7-204ENST00000413232 FAM162BQ5T6X4 162 aa12.63□□□□□ -0.39
CPSF7-204ENST00000413232 SYT8Q8NBV8 401 aa12.63□□□□□ -0.39
CPSF7-204ENST00000413232 LTAP01374 205 aa12.62□□□□□ -0.39
CPSF7-204ENST00000413232 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
CPSF7-204ENST00000413232 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
CPSF7-204ENST00000413232 KLK12Q9UKR0 248 aa12.62□□□□□ -0.39
CPSF7-204ENST00000413232 PHLDA3Q9Y5J5 127 aa12.62□□□□□ -0.39
CPSF7-204ENST00000413232 TRBV6-1A0A0K0K1D8 114 aa12.61□□□□□ -0.39
CPSF7-204ENST00000413232 ARPC5O15511 151 aa12.61□□□□□ -0.39
CPSF7-204ENST00000413232 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
CPSF7-204ENST00000413232 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
CPSF7-204ENST00000413232 UBE2G1P62253 170 aa12.6□□□□□ -0.39
CPSF7-204ENST00000413232 TOR2AQ5JU69 321 aa12.6□□□□□ -0.39
CPSF7-204ENST00000413232 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
CPSF7-204ENST00000413232 IGKV2D-24A0A075B6R9 120 aa12.59□□□□□ -0.39
CPSF7-204ENST00000413232 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
CPSF7-204ENST00000413232 PAGE4O60829 102 aa12.58□□□□□ -0.4
CPSF7-204ENST00000413232 UBE2D3P61077 147 aa12.58□□□□□ -0.4
CPSF7-204ENST00000413232 UBE2D2P62837 147 aa12.58□□□□□ -0.4
CPSF7-204ENST00000413232 RPL19P84098 196 aaKnown RBP12.58□□□□□ -0.4
CPSF7-204ENST00000413232 UBE2WQ96B02 151 aa12.58□□□□□ -0.4
CPSF7-204ENST00000413232 URGCP-MRPS24S4R325 110 aa12.58□□□□□ -0.4
CPSF7-204ENST00000413232 AKR1C3P42330 323 aa12.57□□□□□ -0.4
CPSF7-204ENST00000413232 SCXQ7RTU7 201 aa12.57□□□□□ -0.4
CPSF7-204ENST00000413232 ZFP82Q8N141 532 aa12.57□□□□□ -0.4
CPSF7-204ENST00000413232 COX11Q9Y6N1 276 aa12.57□□□□□ -0.4
CPSF7-204ENST00000413232 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
CPSF7-204ENST00000413232 TRBV10-1A0A0K0K1A3 114 aa12.56□□□□□ -0.4
CPSF7-204ENST00000413232 RBFOX3A6NFN3 312 aa12.56□□□□□ -0.4
CPSF7-204ENST00000413232 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
CPSF7-204ENST00000413232 A0A1B0GV50 99 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 RPL36AP83881 106 aaKnown RBP12.55□□□□□ -0.4
CPSF7-204ENST00000413232 ATRAIDQ6UW56 229 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 Q8N976 141 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 OR10G8Q8NGN5 311 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 RPL36ALQ969Q0 106 aaKnown RBP12.55□□□□□ -0.4
CPSF7-204ENST00000413232 RMI2Q96E14 147 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
CPSF7-204ENST00000413232 A0A087WX48 190 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 MUC21A0A0G2JKD1 596 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 MUC21A0A140T8X8 626 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 SCO2A0A1W2PP80 73 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 PLA2G1BP04054 148 aaKnown RBP12.54□□□□□ -0.4
CPSF7-204ENST00000413232 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 STOML3Q8TAV4 291 aa12.54□□□□□ -0.4
CPSF7-204ENST00000413232 LRP1Q07954 4544 aaKnown RBP12.54□□□□□ -0.4
CPSF7-204ENST00000413232 KRTAP10-4P60372 401 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-204ENST00000413232 PRR27Q6MZM9 219 aa12.53□□□□□ -0.4
CPSF7-204ENST00000413232 SFT2D1Q8WV19 159 aa12.53□□□□□ -0.4
CPSF7-204ENST00000413232 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
CPSF7-204ENST00000413232 CHCHD7Q9BUK0 85 aa12.53□□□□□ -0.4
CPSF7-204ENST00000413232 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.41
CPSF7-204ENST00000413232 J3QL48 77 aa12.52□□□□□ -0.41
CPSF7-204ENST00000413232 RAB4BP61018 213 aa12.52□□□□□ -0.41
CPSF7-204ENST00000413232 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.41
CPSF7-204ENST00000413232 FAM213BQ8TBF2 198 aa12.52□□□□□ -0.41
CPSF7-204ENST00000413232 TMEM262E9PQX1 116 aa12.51□□□□□ -0.41
CPSF7-204ENST00000413232 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
CPSF7-204ENST00000413232 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
CPSF7-204ENST00000413232 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
CPSF7-204ENST00000413232 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-204ENST00000413232 SNAI2O43623 268 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 SSTP61278 116 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 ELOBQ15370 118 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 ZNF56Q15929 161 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 NTM-AS1Q6ZSK4 140 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 BAGE2Q86Y30 109 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 CIRBP-AS1Q8TBR5 109 aa12.5□□□□□ -0.41
CPSF7-204ENST00000413232 KRTAP29-1A8MX34 341 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-204ENST00000413232 CXCL1P09341 107 aa12.49□□□□□ -0.41
CPSF7-204ENST00000413232 RGS21Q2M5E4 152 aa12.49□□□□□ -0.41
CPSF7-204ENST00000413232 C15orf54Q8N8G6 183 aa12.49□□□□□ -0.41
CPSF7-204ENST00000413232 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-204ENST00000413232 KIF25-AS1Q9Y6Z4 181 aa12.49□□□□□ -0.41
CPSF7-204ENST00000413232 S100A9P06702 114 aaKnown RBP12.48□□□□□ -0.41
CPSF7-204ENST00000413232 Q0VG73 95 aa12.48□□□□□ -0.41
CPSF7-204ENST00000413232 ZNF345Q14585 488 aa12.48□□□□□ -0.41
CPSF7-204ENST00000413232 OR5AL1P0C617 328 aa12.47□□□□□ -0.41
CPSF7-204ENST00000413232 KCNIP4Q6PIL6 250 aa12.47□□□□□ -0.41
CPSF7-204ENST00000413232 TMUB2Q71RG4 321 aa12.47□□□□□ -0.41
CPSF7-204ENST00000413232 DEFB104AQ8WTQ1 72 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms