RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 AMTP48728 403 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 OR8A1Q8NGG7 326 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
LINC01643-201ENST00000412218 CNFNQ9BYD5 112 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 IGHV4-4A0A075B6R2 117 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 IGHV3OR16-12A0A075B7B8 117 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 TRAV21A0A0B4J279 112 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 TSTD3H0UI37 97 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 PMCHP20382 165 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 AMTNQ6UX39 209 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 C1orf158Q8N1D5 194 aa7.27□□□□□ -1.25
LINC01643-201ENST00000412218 DEFB131BA0A096LNP1 70 aa7.26□□□□□ -1.25
LINC01643-201ENST00000412218 PKIAP61925 76 aa7.26□□□□□ -1.25
LINC01643-201ENST00000412218 CACNG7P62955 275 aa7.26□□□□□ -1.25
LINC01643-201ENST00000412218 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
LINC01643-201ENST00000412218 ODF3Q96PU9 254 aa7.26□□□□□ -1.25
LINC01643-201ENST00000412218 NAGKQ9UJ70 344 aa7.26□□□□□ -1.25
LINC01643-201ENST00000412218 GOLT1BQ9Y3E0 138 aa7.26□□□□□ -1.25
LINC01643-201ENST00000412218 IGKV3D-20A0A0C4DH25 116 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 DUSP14O95147 198 aaKnown RBP7.25□□□□□ -1.25
LINC01643-201ENST00000412218 SCGB1D1O95968 90 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 OR5AL1P0C617 328 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 SPART-AS1P0CW21 52 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 MED14OSP0DP75 135 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 LEPP41159 167 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 EMP1P54849 157 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 CTAG1AP78358 180 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 TWIST1Q15672 202 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 SMIM15Q7Z3B0 74 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 ORMDL3Q8N138 153 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 FAM19A4Q96LR4 140 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 TMEM191AQ9H0A3 160 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 DKK2Q9UBU2 259 aa7.25□□□□□ -1.25
LINC01643-201ENST00000412218 AGRNO00468 2067 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 TEX48A0A1B0GUV7 120 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 M0R2Z0 102 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 SNAI2O43623 268 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 PPBPP02775 128 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 NTF3P20783 257 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 SPINK13Q1W4C9 94 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 FAM222AQ5U5X8 452 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 CDPF1Q6NVV7 123 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 NIT1Q86X76 327 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 LAMTOR2Q9Y2Q5 125 aa7.24□□□□□ -1.25
LINC01643-201ENST00000412218 KMT2AQ03164 3969 aa7.23□□□□□ -1.25
LINC01643-201ENST00000412218 CRXO43186 299 aaPredicted RBP7.23□□□□□ -1.25
LINC01643-201ENST00000412218 INSP01308 110 aa7.23□□□□□ -1.25
LINC01643-201ENST00000412218 KRTDAPP60985 99 aa7.23□□□□□ -1.25
LINC01643-201ENST00000412218 RRN3P1Q2M238 152 aa7.23□□□□□ -1.25
LINC01643-201ENST00000412218 FA2HQ7L5A8 372 aa7.23□□□□□ -1.25
LINC01643-201ENST00000412218 KLLNB2CW77 178 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 D6R8Y8 96 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 LINC00614P0C842 121 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 TSPOP30536 169 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 ASIPP42127 132 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
LINC01643-201ENST00000412218 PRR9Q5T870 116 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 AMN1Q8IY45 258 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 PRELID3AQ96N28 172 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 TMEM208Q9BTX3 173 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 NDUFAF3Q9BU61 184 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
LINC01643-201ENST00000412218 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 IGHV1-24A0A0C4DH33 117 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 S100A4P26447 101 aaKnown RBP7.21□□□□□ -1.26
LINC01643-201ENST00000412218 CKS2P33552 79 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 SPANXN1Q5VSR9 72 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 TEX43Q6ZNM6 134 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 ZNF575Q86XF7 245 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 PRSS3P2Q8NHM4 247 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 URB1-AS1Q96HZ7 61 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 HSPB8Q9UJY1 196 aa7.21□□□□□ -1.26
LINC01643-201ENST00000412218 C20orf202A1L168 122 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 H3BVH4 76 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 PRM2P04554 102 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 C3orf79P0CE67 100 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 P0DMU3 169 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 FAM231AP0DMU4 169 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 FAM231CP0DMU5 169 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 BTF3P20290 206 aaKnown RBP7.2□□□□□ -1.26
LINC01643-201ENST00000412218 RNASE4P34096 147 aaKnown RBP7.2□□□□□ -1.26
LINC01643-201ENST00000412218 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 RNF185Q96GF1 192 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 MAP1LC3AQ9H492 121 aa7.2□□□□□ -1.26
LINC01643-201ENST00000412218 MUC21A0A0G2JKD1 596 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 MUC21A0A140T8X8 626 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 PLAC8L1A1L4L8 177 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 C7orf71A4D174 169 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 J3KRW8 73 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 LEPROTL1O95214 131 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 DAD1P61803 113 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 ANXA2RQ3ZCQ2 193 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms