RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 AP1S3Q96PC3 154 aa12.64□□□□□ -0.39
PAX3-208ENST00000409828 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
PAX3-208ENST00000409828 SEC11CQ9BY50 192 aa12.64□□□□□ -0.39
PAX3-208ENST00000409828 JPT2Q9H910 190 aa12.64□□□□□ -0.39
PAX3-208ENST00000409828 RHOHQ15669 191 aa12.63□□□□□ -0.39
PAX3-208ENST00000409828 MRPL23Q16540 153 aaKnown RBP12.63□□□□□ -0.39
PAX3-208ENST00000409828 RNF212Q495C1 297 aa12.63□□□□□ -0.39
PAX3-208ENST00000409828 SAMD10Q9BYL1 202 aa12.63□□□□□ -0.39
PAX3-208ENST00000409828 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
PAX3-208ENST00000409828 A0A096LPF7 62 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 PPP1R2P9O14990 202 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 NUDT3O95989 172 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 NTF3P20783 257 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 SLC25A29Q8N8R3 303 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 ALMS1Q8TCU4 4167 aa12.62□□□□□ -0.39
PAX3-208ENST00000409828 KMT2CQ8NEZ4 4911 aaKnown RBP12.62□□□□□ -0.39
PAX3-208ENST00000409828 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
PAX3-208ENST00000409828 F8W036 122 aa12.61□□□□□ -0.39
PAX3-208ENST00000409828 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
PAX3-208ENST00000409828 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
PAX3-208ENST00000409828 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
PAX3-208ENST00000409828 MUC21A0A0G2JKD1 596 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 MUC21A0A140T8X8 626 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 K7EQD1 137 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 ADCYAP1P18509 176 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 RAB4BP61018 213 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 C10orf91Q5T1B1 145 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 FAM74A4Q5TZK3 123 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 ANAPC16Q96DE5 110 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 NAT8BQ9UHF3 227 aa12.6□□□□□ -0.39
PAX3-208ENST00000409828 VPS13DQ5THJ4 4388 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 A0A087WWL8 130 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 MT-ND4LP03901 98 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 GYPEP15421 78 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 CCL18P55774 89 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 LINC00315P59091 139 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
PAX3-208ENST00000409828 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 SACSQ9NZJ4 4579 aa12.59□□□□□ -0.39
PAX3-208ENST00000409828 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
PAX3-208ENST00000409828 SRIP30626 198 aa12.58□□□□□ -0.4
PAX3-208ENST00000409828 TWIST1Q15672 202 aa12.58□□□□□ -0.4
PAX3-208ENST00000409828 Q6ZSN1 163 aa12.58□□□□□ -0.4
PAX3-208ENST00000409828 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
PAX3-208ENST00000409828 PGLYRP4Q96LB8 373 aa12.58□□□□□ -0.4
PAX3-208ENST00000409828 LY6G6CO95867 125 aa12.57□□□□□ -0.4
PAX3-208ENST00000409828 NUP35Q8NFH5 326 aa12.57□□□□□ -0.4
PAX3-208ENST00000409828 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
PAX3-208ENST00000409828 CARHSP1Q9Y2V2 147 aaKnown RBP12.57□□□□□ -0.4
PAX3-208ENST00000409828 EVI2AP22794 236 aa12.56□□□□□ -0.4
PAX3-208ENST00000409828 TIRAPP58753 221 aa12.56□□□□□ -0.4
PAX3-208ENST00000409828 SSTP61278 116 aa12.56□□□□□ -0.4
PAX3-208ENST00000409828 SMIM15Q7Z3B0 74 aa12.56□□□□□ -0.4
PAX3-208ENST00000409828 LINC00694P0DN24 101 aa12.55□□□□□ -0.4
PAX3-208ENST00000409828 RIGQ13278 110 aa12.55□□□□□ -0.4
PAX3-208ENST00000409828 ZNF56Q15929 161 aa12.55□□□□□ -0.4
PAX3-208ENST00000409828 FRZBQ92765 325 aa12.55□□□□□ -0.4
PAX3-208ENST00000409828 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
PAX3-208ENST00000409828 A0A1B0GW15 77 aa12.54□□□□□ -0.4
PAX3-208ENST00000409828 H7C1H1 209 aa12.54□□□□□ -0.4
PAX3-208ENST00000409828 ESRGQ1W209 222 aa12.54□□□□□ -0.4
PAX3-208ENST00000409828 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
PAX3-208ENST00000409828 CTDSP1Q9GZU7 261 aa12.54□□□□□ -0.4
PAX3-208ENST00000409828 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
PAX3-208ENST00000409828 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
PAX3-208ENST00000409828 MRPS16Q9Y3D3 137 aaKnown RBP12.53□□□□□ -0.4
PAX3-208ENST00000409828 LINC00588Q9Y4M8 146 aa12.53□□□□□ -0.4
PAX3-208ENST00000409828 F5H697 171 aa12.52□□□□□ -0.41
PAX3-208ENST00000409828 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
PAX3-208ENST00000409828 IMMP2LQ96T52 175 aa12.52□□□□□ -0.41
PAX3-208ENST00000409828 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.41
PAX3-208ENST00000409828 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
PAX3-208ENST00000409828 M0QY20 66 aa12.51□□□□□ -0.41
PAX3-208ENST00000409828 RPL36AP83881 106 aaKnown RBP12.51□□□□□ -0.41
PAX3-208ENST00000409828 ATP5L2Q7Z4Y8 100 aa12.51□□□□□ -0.41
PAX3-208ENST00000409828 RPL36ALQ969Q0 106 aaKnown RBP12.51□□□□□ -0.41
PAX3-208ENST00000409828 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
PAX3-208ENST00000409828 S100A8P05109 93 aa12.5□□□□□ -0.41
PAX3-208ENST00000409828 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
PAX3-208ENST00000409828 A0A087WWC5 75 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 MGPP08493 103 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 RHEBQ15382 184 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 Q9UF83 564 aa12.49□□□□□ -0.41
PAX3-208ENST00000409828 GAGE12JA6NER3 117 aa12.48□□□□□ -0.41
PAX3-208ENST00000409828 UBE2D3P61077 147 aa12.48□□□□□ -0.41
PAX3-208ENST00000409828 UBE2D2P62837 147 aa12.48□□□□□ -0.41
PAX3-208ENST00000409828 GAGE1Q13065 139 aa12.48□□□□□ -0.41
PAX3-208ENST00000409828 GAGE4Q13068 117 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms