RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 NXPH4O95158 308 aa11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 JPT2Q9H910 190 aa11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 DAZ1Q9NQZ3 744 aaKnown RBP11.37□□□□□ -0.59
LYSMD4-204ENST00000409796 KLLNB2CW77 178 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 APOMO95445 188 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 PPP1R17O96001 155 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 FOXI1Q12951 378 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 FHL3Q13643 280 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 C10orf105Q8TEF2 133 aa11.36□□□□□ -0.59
LYSMD4-204ENST00000409796 MT-ATP8P03928 68 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 CRYGDP07320 174 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 PLA2G2AP14555 144 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 TSHBP01222 138 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 GATA3P23771 443 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 SMCPP49901 116 aaPredicted RBP11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
LYSMD4-204ENST00000409796 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 PLEKHB2Q96CS7 222 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 IGHV4OR15-8A0A075B7B6 117 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 A0A087WW49 117 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 TSPAN13O95857 204 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
LYSMD4-204ENST00000409796 IGHV4-30-2A0A087WSY4 118 aa11.33□□□□□ -0.59
LYSMD4-204ENST00000409796 A0A087WWL8 130 aa11.33□□□□□ -0.59
LYSMD4-204ENST00000409796 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.59
LYSMD4-204ENST00000409796 CCL19Q99731 98 aa11.33□□□□□ -0.59
LYSMD4-204ENST00000409796 TRAV12-3A0A0B4J271 114 aa11.33□□□□□ -0.6
LYSMD4-204ENST00000409796 POLR2KP53803 58 aaKnown RBP11.33□□□□□ -0.6
LYSMD4-204ENST00000409796 CFHR3Q02985 330 aa11.33□□□□□ -0.6
LYSMD4-204ENST00000409796 TMEM95Q3KNT9 176 aa11.33□□□□□ -0.6
LYSMD4-204ENST00000409796 ZFP2Q6ZN57 461 aa11.33□□□□□ -0.6
LYSMD4-204ENST00000409796 DCANP1Q8TF63 244 aa11.33□□□□□ -0.6
LYSMD4-204ENST00000409796 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 CD7P09564 240 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 COX6B1P14854 86 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 EMP1P54849 157 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 XGP55808 180 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.69e-6■■□□□ 12.6
LYSMD4-204ENST00000409796 IGLV4-69A0A075B6H9 119 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 ID1P41134 155 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 RPL39P62891 51 aaKnown RBP11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 RPL32P62910 135 aaKnown RBP11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 TENM4Q6N022 2769 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 F5H697 171 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 K7EMT4 169 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 HOXA3O43365 443 aaPredicted RBP11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 RNF183Q96D59 192 aa11.32□□□□□ -0.6
LYSMD4-204ENST00000409796 AVPP01185 164 aa11.31□□□□□ -0.6
LYSMD4-204ENST00000409796 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
LYSMD4-204ENST00000409796 Q6ZUT4 128 aa11.31□□□□□ -0.6
LYSMD4-204ENST00000409796 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
LYSMD4-204ENST00000409796 MSMBP08118 114 aa11.31□□□□□ -0.6
LYSMD4-204ENST00000409796 J3QKU1 62 aa11.3□□□□□ -0.6
LYSMD4-204ENST00000409796 ATP5J2P56134 94 aa11.3□□□□□ -0.6
LYSMD4-204ENST00000409796 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
LYSMD4-204ENST00000409796 VCYO14598 125 aa11.3□□□□□ -0.6
LYSMD4-204ENST00000409796 PMVKQ15126 192 aa11.3□□□□□ -0.6
LYSMD4-204ENST00000409796 COL12A1Q99715 3063 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 MYO18BQ8IUG5 2567 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 MAST4O15021 2626 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 C10orf99Q6UWK7 81 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
LYSMD4-204ENST00000409796 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 PTH2Q96A98 100 aa11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 LGALS9O00182 355 aa11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
LYSMD4-204ENST00000409796 LINC01549A6NIU2 74 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 HERVK_113P61574 105 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 PAPPA-AS1Q5QFB9 102 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 TMEM141Q96I45 108 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 CARD19Q96LW7 228 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 C9orf85Q96MD7 179 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 TIMM17AQ99595 171 aa11.27□□□□□ -0.6
LYSMD4-204ENST00000409796 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms