RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ZNF586Q9NXT0 402 aa4.15□□□□□ -1.75
LSM5-203ENST00000409782 TIMM9Q9Y5J7 89 aa4.15□□□□□ -1.75
LSM5-203ENST00000409782 PLAC8L1A1L4L8 177 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 ZNF705GA8MUZ8 300 aaPredicted RBP4.14□□□□□ -1.75
LSM5-203ENST00000409782 IFNA5P01569 189 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 P0DMU3 169 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 FAM231AP0DMU4 169 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 FAM231CP0DMU5 169 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 PYYP10082 97 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 TAS2R45P59539 299 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 UBE2L3P68036 154 aaKnown RBP4.14□□□□□ -1.75
LSM5-203ENST00000409782 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 C9orf129Q5T035 196 aaKnown RBP4.14□□□□□ -1.75
LSM5-203ENST00000409782 SCGB1C1Q8TD33 95 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 LINC01587Q99440 93 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 FUT9Q9Y231 359 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 ALG5Q9Y673 324 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 V9GYY9 64 aa4.14□□□□□ -1.75
LSM5-203ENST00000409782 M0R3E3 92 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 OR7C2O60412 319 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 SLC25A5P05141 298 aaKnown RBP4.13□□□□□ -1.75
LSM5-203ENST00000409782 NMBP08949 121 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 GIPP09681 153 aaPredicted RBP4.13□□□□□ -1.75
LSM5-203ENST00000409782 ZNF266Q14584 549 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 CEND1Q8N111 149 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 LYPD1Q8N2G4 141 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 LINC00469Q8N7U9 141 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 C15orf53Q8NAA6 179 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 BLNKQ8WV28 456 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 FXYD5Q96DB9 178 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 PHYHIPLQ96FC7 376 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 FAM19A4Q96LR4 140 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 PYGO2Q9BRQ0 406 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 LINC00467Q9BRT7 94 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 SMIM3Q9BZL3 60 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 MED28Q9H204 178 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 TIMM8BQ9Y5J9 83 aaPredicted RBP4.13□□□□□ -1.75
LSM5-203ENST00000409782 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
LSM5-203ENST00000409782 IGKV2-40A0A087WW87 121 aaPredicted RBP4.12□□□□□ -1.75
LSM5-203ENST00000409782 IGHV3OR16-9A0A0B4J2B5 98 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 C7orf71A4D174 169 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 RBAKDNA6NC62 111 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 KLLNB2CW77 178 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 IGKV2D-40P01614 121 aaPredicted RBP4.12□□□□□ -1.75
LSM5-203ENST00000409782 ATP5G1P05496 136 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 OR10J4P0C629 311 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 NBEAP1P0C6P0 100 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 HTN3P15516 51 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 AZU1P20160 251 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 ATP5G3P48201 142 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 ACOT6Q3I5F7 207 aaPredicted RBP4.12□□□□□ -1.75
LSM5-203ENST00000409782 TMEM78Q5T7P6 136 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 Q6ZR54 194 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 LINC00173Q6ZV60 143 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 EXOC3-AS1Q8N2X6 119 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 LINC00612Q8N6U2 182 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 ZNF680Q8NEM1 530 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 AQP10Q96PS8 301 aa4.12□□□□□ -1.75
LSM5-203ENST00000409782 PRM2P04554 102 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 DEFB130BP0DP73 79 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 DEFB130AP0DP74 79 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
LSM5-203ENST00000409782 HTN1P15515 57 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 M6PRP20645 277 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 CSN1S1P47710 185 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 ZNF138P52744 262 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 RPL18AQ02543 176 aaKnown RBP4.11□□□□□ -1.75
LSM5-203ENST00000409782 DAZ2Q13117 558 aaKnown RBP4.11□□□□□ -1.75
LSM5-203ENST00000409782 ERCC8Q13216 396 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 BTN1A1Q13410 526 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 RGS21Q2M5E4 152 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 MRPL55Q7Z7F7 128 aaKnown RBP4.11□□□□□ -1.75
LSM5-203ENST00000409782 UBE2DNLQ8IWF7 75 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 ZFAND2AQ8N6M9 145 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 RNF185Q96GF1 192 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 PSMG3Q9BT73 122 aaPredicted RBP4.11□□□□□ -1.75
LSM5-203ENST00000409782 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 WFDC1Q9HC57 220 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 NOP10Q9NPE3 64 aaKnown RBP4.11□□□□□ -1.75
LSM5-203ENST00000409782 LENEPQ9Y5L5 61 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 FRAS1Q86XX4 4008 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 DNAH17Q9UFH2 4485 aa4.11□□□□□ -1.75
LSM5-203ENST00000409782 FAT2Q9NYQ8 4349 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 TRAV12-3A0A0B4J271 114 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 F5H768 121 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 GCGP01275 180 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 CDC34P49427 236 aaPredicted RBP4.1□□□□□ -1.75
LSM5-203ENST00000409782 RAB2AP61019 212 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 HERVK_113P61574 105 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 COTL1Q14019 142 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 RNF212Q495C1 297 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 FAM74A1Q5RGS3 127 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 IBA57Q5T440 356 aaKnown RBP4.1□□□□□ -1.75
LSM5-203ENST00000409782 EIF4E3Q8N5X7 224 aaKnown RBP4.1□□□□□ -1.75
LSM5-203ENST00000409782 C11orf72Q8NBR9 251 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 Q8TAT8 98 aa4.1□□□□□ -1.75
LSM5-203ENST00000409782 CMTM2Q8TAZ6 248 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms