RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RAB5BP61020 215 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 MRPL54Q6P161 138 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 OR4C5Q8NGB2 326 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 TEX48A0A1B0GUV7 120 aa9.96□□□□□ -0.82
CHRNA1-204ENST00000409323 F2Z2F3 143 aa9.96□□□□□ -0.82
CHRNA1-204ENST00000409323 F5H768 121 aa9.96□□□□□ -0.82
CHRNA1-204ENST00000409323 HOXA5P20719 270 aa9.96□□□□□ -0.82
CHRNA1-204ENST00000409323 ATP5L2Q7Z4Y8 100 aa9.96□□□□□ -0.82
CHRNA1-204ENST00000409323 C14orf178Q8N769 122 aaPredicted RBP9.96□□□□□ -0.82
CHRNA1-204ENST00000409323 A0A1B0GXF2 115 aa9.95□□□□□ -0.82
CHRNA1-204ENST00000409323 NXPH4O95158 308 aa9.95□□□□□ -0.82
CHRNA1-204ENST00000409323 EVI2AP22794 236 aa9.95□□□□□ -0.82
CHRNA1-204ENST00000409323 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 TRAV4A0A0B4J268 109 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 A0A0J9YY99 117 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 A0A1B0GUT8 65 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 RS1O15537 224 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 ATP5G1P05496 136 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 CACNG7P62955 275 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 BORCS7Q96B45 105 aa9.94□□□□□ -0.82
CHRNA1-204ENST00000409323 TRGV4A0A0C4DH28 118 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 LOC105371267A0A1B0GV96 52 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 CRYGDP07320 174 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 MGPP08493 103 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 CAMPP49913 170 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 Q6ZSN1 163 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 FRZBQ92765 325 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BKO60814 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 MT-ND6P03923 174 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BJP06899 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BOP23527 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BBP33778 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BDP58876 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BCP62807 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST2H2BEQ16778 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 WDR73Q6P4I2 378 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BHQ93079 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 PTH2Q96A98 100 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 AP1S3Q96PC3 154 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BNQ99877 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 HIST1H2BMQ99879 126 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 IGHV4-4A0A075B6R2 117 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 C5orf52A6NGY3 159 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 A8MWV9 139 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 FHL2Q14192 279 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
CHRNA1-204ENST00000409323 TRAV10A0A0B4J240 114 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 F5H697 171 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 TRGC1P0CF51 173 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 RIGQ13278 110 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 ZNF56Q15929 161 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 UFSP1Q6NVU6 142 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 Q9UF83 564 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 TRAPPC1Q9Y5R8 145 aa9.91□□□□□ -0.82
CHRNA1-204ENST00000409323 TRAV26-1A0A087WT03 109 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 LOC100131303A0A0U1RQF7 123 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 A0A1B0GW15 77 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 IGLL5B9A064 214 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 HLA-DQA1P01909 254 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 P0DMU3 169 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 FAM231AP0DMU4 169 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 FAM231CP0DMU5 169 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 MUC7Q8TAX7 377 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 C18orf15Q96N68 181 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 KIF25-AS1Q9Y6Z4 181 aa9.9□□□□□ -0.82
CHRNA1-204ENST00000409323 TRAV26-2A0A0B4J265 109 aa9.89□□□□□ -0.83
CHRNA1-204ENST00000409323 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
CHRNA1-204ENST00000409323 LINC00315P59091 139 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 RAB4BP61018 213 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 HBBP68871 147 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 AMN1Q8IY45 258 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 SLC25A29Q8N8R3 303 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
CHRNA1-204ENST00000409323 A0A096LPF7 62 aa9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 PAX4O43316 350 aa9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 CRYBA4P53673 196 aa9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 CEMP1Q6PRD7 247 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 SMIM15Q7Z3B0 74 aa9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-204ENST00000409323 SMKR1H3BMG3 65 aa9.86□□□□□ -0.83
CHRNA1-204ENST00000409323 RHODO00212 210 aa9.86□□□□□ -0.83
CHRNA1-204ENST00000409323 NUDT3O95989 172 aa9.86□□□□□ -0.83
CHRNA1-204ENST00000409323 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
CHRNA1-204ENST00000409323 ZFP2Q6ZN57 461 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms