RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 K7ERU9 68 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 CRYGDP07320 174 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 OR11H1Q8NG94 326 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 MDFICQ9P1T7 246 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
COL23A1-202ENST00000407622 DUX5Q96PT3 197 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 HIST1H4GQ99525 98 aa12.32□□□□□ -0.44
COL23A1-202ENST00000407622 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 A0A087WW49 117 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 EMP1P54849 157 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 F5H697 171 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 POLR2KP53803 58 aaKnown RBP12.31□□□□□ -0.44
COL23A1-202ENST00000407622 FAM74A4Q5TZK3 123 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 ZNF580Q9UK33 172 aa12.31□□□□□ -0.44
COL23A1-202ENST00000407622 A0A0J9YX75 114 aa12.3□□□□□ -0.44
COL23A1-202ENST00000407622 SYNJ2BPP57105 145 aa12.3□□□□□ -0.44
COL23A1-202ENST00000407622 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
COL23A1-202ENST00000407622 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
COL23A1-202ENST00000407622 PRADC1Q9BSG0 188 aa12.3□□□□□ -0.44
COL23A1-202ENST00000407622 A0A096LNT2 108 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 PPP1R17O96001 155 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 LGALS1P09382 135 aaKnown RBP12.29□□□□□ -0.44
COL23A1-202ENST00000407622 IGLL5B9A064 214 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 C12orf74Q32Q52 190 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 HIST2H2BCQ6DN03 193 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
COL23A1-202ENST00000407622 HELZ2Q9BYK8 2649 aaKnown RBP12.29□□□□□ -0.44
COL23A1-202ENST00000407622 IGLV4-69A0A075B6H9 119 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 E9PLD3 99 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 K7EQG2 157 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 GATA3P23771 443 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 TAL2Q16559 108 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 Q8N1Y9 231 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 LINC01356Q8N9X3 169 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 C9orf85Q96MD7 179 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 BEX4Q9NWD9 120 aaPredicted RBP12.28□□□□□ -0.44
COL23A1-202ENST00000407622 ABCA12Q86UK0 2595 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 C11orf86A6NJI1 115 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 MORN3Q6PF18 240 aaPredicted RBP12.28□□□□□ -0.44
COL23A1-202ENST00000407622 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
COL23A1-202ENST00000407622 TGFAP01135 160 aa12.27□□□□□ -0.44
COL23A1-202ENST00000407622 CD300EQ496F6 205 aaPredicted RBP12.27□□□□□ -0.44
COL23A1-202ENST00000407622 KLHL30-AS1Q8NEE0 82 aa12.27□□□□□ -0.45
COL23A1-202ENST00000407622 APCP25054 2843 aa12.26□□□□□ -0.45
COL23A1-202ENST00000407622 SNRPD3P62318 126 aaKnown RBP12.26□□□□□ -0.45
COL23A1-202ENST00000407622 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
COL23A1-202ENST00000407622 LGALS9O00182 355 aa12.26□□□□□ -0.45
COL23A1-202ENST00000407622 SAMD13Q5VXD3 122 aa12.26□□□□□ -0.45
COL23A1-202ENST00000407622 ZNF256Q9Y2P7 627 aaPredicted RBP12.26□□□□□ -0.45
COL23A1-202ENST00000407622 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 VCYO14598 125 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 LRRC75A-AS1Q8N1F1 130 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 ZNF479Q96JC4 524 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 TEX15Q9BXT5 2789 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 ZNF56Q15929 161 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 ODF3Q96PU9 254 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 KIR2DL4Q99706 377 aa12.25□□□□□ -0.45
COL23A1-202ENST00000407622 NAV2Q8IVL1 2488 aa12.24□□□□□ -0.45
COL23A1-202ENST00000407622 G3V4G9 280 aa12.24□□□□□ -0.45
COL23A1-202ENST00000407622 HOXD3P31249 432 aaPredicted RBP12.24□□□□□ -0.45
COL23A1-202ENST00000407622 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
COL23A1-202ENST00000407622 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
COL23A1-202ENST00000407622 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 LINC01619G3V211 115 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 M0QY20 66 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 OPRPNQ99935 248 aaPredicted RBP12.23□□□□□ -0.45
COL23A1-202ENST00000407622 ZNF702PQ9H963 129 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 PMVKQ15126 192 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 AMTNQ6UX39 209 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 VPREB3Q9UKI3 123 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
COL23A1-202ENST00000407622 TMEM89A2RUT3 159 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
COL23A1-202ENST00000407622 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
COL23A1-202ENST00000407622 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 Q5PR19 223 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 ZNF469Q96JG9 3925 aaPredicted RBP12.22□□□□□ -0.45
COL23A1-202ENST00000407622 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 A0A1B0GWB2 263 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 TSPEAR-AS2P59090 65 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 SCGB2A2Q13296 93 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 FOXI2Q6ZQN5 318 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 CR1P17927 2039 aa12.22□□□□□ -0.45
COL23A1-202ENST00000407622 RRN3P1Q2M238 152 aa12.21□□□□□ -0.45
COL23A1-202ENST00000407622 SCGB1D4Q6XE38 83 aa12.21□□□□□ -0.45
COL23A1-202ENST00000407622 H3BMG7 143 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms