RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 IGHV2-70P01814 119 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 C9JQL5 133 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 ASPHD1Q5U4P2 390 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 PROK2Q9HC23 129 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 CFC1BP0CG36 223 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 CFC1P0CG37 223 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 WIPF3A6NGB9 483 aa9.44□□□□□ -0.9
SMCR8-201ENST00000406438 H0YGX0 51 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 C17orf77Q96MU5 243 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 IGLC7A0M8Q6 106 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 PROP1O75360 226 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 IGHV3-30P01768 117 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 IGHV3-33P01772 117 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 IGHV3-30-3P0DP02 117 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 IGHV3-30-5P0DP03 117 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 ETV2O00321 342 aaPredicted RBP9.43□□□□□ -0.9
SMCR8-201ENST00000406438 NREPQ16612 68 aa9.43□□□□□ -0.9
SMCR8-201ENST00000406438 ZFP2Q6ZN57 461 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 FHL1Q13642 323 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
SMCR8-201ENST00000406438 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
SMCR8-201ENST00000406438 PLA2G2CQ5R387 149 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 NPBQ8NG41 125 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 CACNA1AO00555 2505 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 CUL9Q8IWT3 2517 aa9.42□□□□□ -0.9
SMCR8-201ENST00000406438 ZNF503-AS2A6NEH8 195 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 IGFBPL1Q8WX77 278 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 LRRK2Q5S007 2527 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 K7EN84 100 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 ATP5G1P05496 136 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 IL15RAQ13261 267 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 POU2AF1Q16633 256 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 C10orf91Q5T1B1 145 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 PRB2P02812 416 aaPredicted RBP9.41□□□□□ -0.9
SMCR8-201ENST00000406438 NDUFA1O15239 70 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 NDUFC2O95298 119 aa9.41□□□□□ -0.9
SMCR8-201ENST00000406438 LY6G6EA0A0G2JKS1 128 aa9.4□□□□□ -0.9
SMCR8-201ENST00000406438 U3KQA8 63 aa9.4□□□□□ -0.9
SMCR8-201ENST00000406438 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.9
SMCR8-201ENST00000406438 CENPVL3A0A0U1RRI6 287 aa9.4□□□□□ -0.9
SMCR8-201ENST00000406438 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.91
SMCR8-201ENST00000406438 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 NPSP0C0P6 89 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 HIVEP3Q5T1R4 2406 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 IL17DQ8TAD2 202 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 H0Y9J4 135 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 TMEM256-PLSCR3K7ERE1 68 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 ATOX1O00244 68 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 COL4A4P53420 1690 aaPredicted RBP9.39□□□□□ -0.91
SMCR8-201ENST00000406438 ZFYVE26Q68DK2 2539 aa9.39□□□□□ -0.91
SMCR8-201ENST00000406438 IGHV4-38-2P0DP08 117 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 CXCL5P42830 114 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 PSMB8P28062 276 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 ZNF747Q9BV97 191 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 PIP4P1Q86T03 277 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 ARTNQ5T4W7 220 aa9.38□□□□□ -0.91
SMCR8-201ENST00000406438 C5orf56Q8N8D9 126 aa9.37□□□□□ -0.91
SMCR8-201ENST00000406438 B9D2Q9BPU9 175 aa9.37□□□□□ -0.91
SMCR8-201ENST00000406438 C14orf177Q52M58 125 aa9.37□□□□□ -0.91
SMCR8-201ENST00000406438 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
SMCR8-201ENST00000406438 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 IGHV4-30-2A0A087WSY4 118 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 IGHV7-81A0A0B4J1V7 117 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 C1orf147Q96MC9 270 aaPredicted RBP9.36□□□□□ -0.91
SMCR8-201ENST00000406438 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 IGKV4-1P06312 121 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 JMJD7-PLA2G4BH0Y9G9 81 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 PRR20EP86478 221 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 PRR20CP86479 221 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 PRR20DP86480 221 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 PRR20BP86481 221 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 PRR20AP86496 221 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 AJUBAQ96IF1 538 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 NCR3O14931 201 aa9.36□□□□□ -0.91
SMCR8-201ENST00000406438 LINC01620Q4KN68 170 aa9.35□□□□□ -0.91
SMCR8-201ENST00000406438 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
SMCR8-201ENST00000406438 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
SMCR8-201ENST00000406438 IGLV3-1P01715 115 aa9.35□□□□□ -0.91
SMCR8-201ENST00000406438 SMAD5-AS1Q9Y6J3 95 aa9.35□□□□□ -0.91
SMCR8-201ENST00000406438 IGLV11-55A0A075B6I3 123 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 CCL25O15444 150 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 A0A087WW49 117 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 Q8N1Y9 231 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 RNF138Q8WVD3 245 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 ESM1Q9NQ30 184 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 IGKV3D-7A0A0C4DH55 119 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 BLCAPP62952 87 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 CTSZQ9UBR2 303 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 RSPO1Q2MKA7 263 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms