RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 KLRD1Q13241 179 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 JOSD1Q15040 202 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 VMO1Q7Z5L0 202 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 BAGE2Q86Y30 109 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 OR8I2Q8N0Y5 310 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 DYNAPQ8N1N2 210 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 TTC9CQ8N5M4 171 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 Q8N6K4 173 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 GATD1Q8NB37 220 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 SMIM12Q96EX1 92 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 PACRGQ96M98 296 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 LINC01587Q99440 93 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 GNB1LQ9BYB4 327 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 RNASE7Q9H1E1 156 aaKnown RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 MRPL27Q9P0M9 148 aaKnown RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 TMEM14CQ9P0S9 112 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 HIGD1AQ9Y241 93 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 AKAP13Q12802 2813 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 ARID1AO14497 2285 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 ESPL1Q14674 2120 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 TRAV30A0A087WSZ9 112 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 A8MUU9 505 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 LINC00587B1AMM8 73 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGLL5B9A064 214 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 C19orf84I3L1E1 186 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 NUPR1O60356 82 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 MT-ND6P03923 174 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 SLC25A5P05141 298 aaKnown RBP2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 GZMBP10144 247 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 HIST1H1EP10412 219 aaKnown RBP2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 MGST1P10620 155 aaKnown RBP2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 ESDP10768 282 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 CBLN1P23435 193 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 UBE2G1P62253 170 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 GNG5P63218 68 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 CTAG1AP78358 180 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 Q0VG73 95 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 MOBPQ13875 183 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 HES1Q14469 280 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 IBA57Q5T440 356 aaKnown RBP2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 RASL11AQ6T310 242 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 LYPD1Q8N2G4 141 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 C5orf17Q8NAS9 161 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 SHANK2-AS3Q9BTD1 123 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 FAM103A1Q9BTL3 118 aaKnown RBP2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 NAT8BQ9UHF3 227 aa2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 TBL2Q9Y4P3 447 aaKnown RBP2.74□□□□□ -1.97
HMGB3P18-201ENST00000406327 FAM186AA6NE01 2351 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 PRR14LQ5THK1 2151 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 TRBV19A0A075B6N1 114 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 TRBV6-1A0A0K0K1D8 114 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 H3BRN7 92 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 SPINK4O60575 86 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 LTAP01374 205 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 HLA-DRB1P01911 266 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 TCRAP04437 139 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGLC2P0DOY2 106 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 BRS3P32247 399 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 TCL1AP56279 114 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 PKIAP61925 76 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 KLK9Q2XQG4 91 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 TMEM136Q6ZRR5 245 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 S100A7AQ86SG5 101 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 BPIFA4PQ86YQ2 179 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 AMN1Q8IY45 258 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 TSKUQ8WUA8 353 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 RMI2Q96E14 147 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 BPESC1Q9GZL8 116 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 OTORQ9NRC9 128 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 ZNF586Q9NXT0 402 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 ZNF492Q9P255 531 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 KLK9Q9UKQ9 250 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 DYSFO75923 2080 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 MGAQ8IWI9 3026 aa2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 INTS1Q8N201 2190 aaKnown RBP2.73□□□□□ -1.97
HMGB3P18-201ENST00000406327 KIAA2026Q5HYC2 2103 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 DSPP15924 2871 aaKnown RBP2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 GRIFINA4D1Z8 144 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 C19orf71A6NCJ1 209 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 C16orf90A8MZG2 172 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 J3QLI3 93 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 NPFFO15130 113 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 GNG7O60262 68 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 DSCAMO60469 2012 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 PRB2P02812 416 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 CTSGP08311 255 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 TPPP2P59282 170 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 RAB4BP61018 213 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 CHD3Q12873 2000 aaKnown RBP2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 PDE6HQ13956 83 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 Q56UQ5 140 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 MRPL54Q6P161 138 aaKnown RBP2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 LINC00322Q6ZN03 302 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 BAGE3Q86Y29 109 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 EXOC3-AS1Q8N2X6 119 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 ZNF664Q8N3J9 261 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 NUP35Q8NFH5 326 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 CMTM2Q8TAZ6 248 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 HSPB9Q9BQS6 159 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms