RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 DEFB4AO15263 64 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 GATA1P15976 413 aaPredicted RBP2.68□□□□□ -1.98
RTN4-208ENST00000404909 SAMD5Q5TGI4 173 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 ZNF705AQ6ZN79 300 aaPredicted RBP2.68□□□□□ -1.98
RTN4-208ENST00000404909 ORMDL3Q8N138 153 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 RNASE8Q8TDE3 154 aaKnown RBP2.68□□□□□ -1.98
RTN4-208ENST00000404909 RNF185Q96GF1 192 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 PRELID3AQ96N28 172 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 DPH3P1Q9H4G8 78 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 TENM3Q9P273 2699 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 KIR2DL5BA0A0G2JN68 375 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 KIR2DL5BA0A0G2JPC4 375 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 ZNF56Q15929 161 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 CFAP161Q6P656 301 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 KIR2DL5AQ8N109 375 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 KIR2DL5BQ8NHK3 375 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 C18orf32Q8TCD1 76 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 LINC00467Q9BRT7 94 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 C5orf52A6NGY3 159 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 SERF1AO75920 110 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 NXPH4O95158 308 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 IGHV3-53P01767 116 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 S100A2P29034 98 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 Q6ZTI0 123 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 GATD1Q8NB37 220 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 OR11H2Q8NH07 326 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 C16orf74Q96GX8 76 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 SPXQ9BT56 116 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 NUPR1O60356 82 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 NPYP01303 97 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 AKR1D1P51857 326 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 RIPPLY3P57055 190 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 RNASEKQ6P5S7 137 aaKnown RBP2.67□□□□□ -1.98
RTN4-208ENST00000404909 TRGV2A0A075B6R0 118 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 GAGE12BA1L429 117 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 GAGE7O76087 117 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 CRYGDP07320 174 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 GAGE12FP0CL80 117 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 GAGE12GP0CL81 117 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 GAGE12IP0CL82 117 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 DEFB130BP0DP73 79 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 DEFB130AP0DP74 79 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 OR10J3Q5JRS4 329 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 PRSS3P2Q8NHM4 247 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 MRAPQ8TCY5 172 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 DEFB104AQ8WTQ1 72 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 X6R8D5 127 aa2.67□□□□□ -1.98
RTN4-208ENST00000404909 PLAC8L1A1L4L8 177 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 TNFRSF6BO95407 300 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 PPBPP02775 128 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 FABP4P15090 132 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 PMCHP20382 165 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 HOXA5P20719 270 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 IFI27P40305 119 aaPredicted RBP2.66□□□□□ -1.98
RTN4-208ENST00000404909 Q0VG73 95 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 LCE2DQ5TA82 110 aaPredicted RBP2.66□□□□□ -1.98
RTN4-208ENST00000404909 CFAP126Q5VTH2 177 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 NIT1Q86X76 327 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 OR4C5Q8NGB2 326 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 RASL10AQ92737 203 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 RPL39LQ96EH5 51 aaKnown RBP2.66□□□□□ -1.98
RTN4-208ENST00000404909 RETNQ9HD89 108 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 KIF25-AS1Q9Y6Z4 181 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 A8MWV9 139 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 UBE2CO00762 179 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 LINC00315P59091 139 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 PMCHL1Q16048 86 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 SUMO4Q6EEV6 95 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 Q6ZWC4 215 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 HIST3H2BBQ8N257 126 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 FAM19A2Q8N3H0 131 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 MRAP2Q96G30 205 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 U3KQK5 164 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 STAB2Q8WWQ8 2551 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 IGHV4-28A0A0C4DH34 117 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 PRSS47A8MTI9 375 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 HSBP1O75506 76 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 LINC00614P0C842 121 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 LINC00310P59036 64 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 DAZ2Q13117 558 aaKnown RBP2.66□□□□□ -1.98
RTN4-208ENST00000404909 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 RNF183Q96D59 192 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 ZNF479Q96JC4 524 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 MAP1LC3AQ9H492 121 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 SMIM9A6NGZ8 99 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 K7EIL1 84 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 P0DMU3 169 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 FAM231AP0DMU4 169 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 FAM231CP0DMU5 169 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 AMTP48728 403 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 COA6Q5JTJ3 125 aaKnown RBP2.66□□□□□ -1.98
RTN4-208ENST00000404909 POM121L12Q8N7R1 296 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 NRACQ8N912 160 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 IL17DQ8TAD2 202 aa2.66□□□□□ -1.98
RTN4-208ENST00000404909 IFITM10A6NMD0 228 aa2.65□□□□□ -1.98
RTN4-208ENST00000404909 LGALS9BQ3B8N2 356 aa2.65□□□□□ -1.98
RTN4-208ENST00000404909 FAM222AQ5U5X8 452 aa2.65□□□□□ -1.98
RTN4-208ENST00000404909 Q6ZSN1 163 aa2.65□□□□□ -1.98
RTN4-208ENST00000404909 NEGR1Q7Z3B1 354 aa2.65□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BLQ99880 126 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms