RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 COX6B1P14854 86 aa13.24□□□□□ -0.29
CDK11A-208ENST00000404249 RPL39P62891 51 aaKnown RBP13.24□□□□□ -0.29
CDK11A-208ENST00000404249 RRN3P1Q2M238 152 aa13.24□□□□□ -0.29
CDK11A-208ENST00000404249 TRAV12-2A0A075B6T6 113 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 IGKV3-20P01619 116 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
CDK11A-208ENST00000404249 FAM74A4Q5TZK3 123 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.23□□□□□ -0.299e-9■■■■■ 38
CDK11A-208ENST00000404249 RPL24P83731 157 aaKnown RBP13.23□□□□□ -0.29
CDK11A-208ENST00000404249 PMVKQ15126 192 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 CD300EQ496F6 205 aaPredicted RBP13.23□□□□□ -0.29
CDK11A-208ENST00000404249 PAPPA-AS1Q5QFB9 102 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 PLEKHB2Q96CS7 222 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
CDK11A-208ENST00000404249 SCGB1D4Q6XE38 83 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 TIMM17AQ99595 171 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 TRBV6-5A0A0K0K1A5 114 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 TEX48A0A1B0GUV7 120 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 K7EQG2 157 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 EMP1P54849 157 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 MDFICQ9P1T7 246 aa13.22□□□□□ -0.29
CDK11A-208ENST00000404249 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.29
CDK11A-208ENST00000404249 HERVK_113P61574 105 aa13.21□□□□□ -0.29
CDK11A-208ENST00000404249 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
CDK11A-208ENST00000404249 DSCR9P59020 149 aa13.21□□□□□ -0.3
CDK11A-208ENST00000404249 ZNF56Q15929 161 aa13.21□□□□□ -0.3
CDK11A-208ENST00000404249 Q8N1Y9 231 aa13.21□□□□□ -0.3
CDK11A-208ENST00000404249 NRGNQ92686 78 aa13.21□□□□□ -0.3
CDK11A-208ENST00000404249 F8W1H4 67 aa13.2□□□□□ -0.3
CDK11A-208ENST00000404249 H3BMG7 143 aa13.2□□□□□ -0.3
CDK11A-208ENST00000404249 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
CDK11A-208ENST00000404249 IGHV1OR15-1A0A075B7D0 117 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
CDK11A-208ENST00000404249 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
CDK11A-208ENST00000404249 LINC01356Q8N9X3 169 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 SPG11Q96JI7 2443 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 SYNJ2BPP57105 145 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 AMTNQ6UX39 209 aa13.19□□□□□ -0.3
CDK11A-208ENST00000404249 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
CDK11A-208ENST00000404249 M0QY20 66 aa13.18□□□□□ -0.3
CDK11A-208ENST00000404249 COL12A1Q99715 3063 aa13.18□□□□□ -0.3
CDK11A-208ENST00000404249 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDK11A-208ENST00000404249 WFDC2Q14508 124 aa13.18□□□□□ -0.3
CDK11A-208ENST00000404249 CSPG4Q6UVK1 2322 aa13.17□□□□□ -0.3
CDK11A-208ENST00000404249 PGPEP1Q9NXJ5 209 aa13.17□□□□□ -0.3
CDK11A-208ENST00000404249 NSUN5P1Q3KNT7 163 aa13.17□□□□□ -0.3
CDK11A-208ENST00000404249 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
CDK11A-208ENST00000404249 SPANXB1Q9NS25 103 aaPredicted RBP13.17□□□□□ -0.3
CDK11A-208ENST00000404249 TMEM170BQ5T4T1 132 aa13.16□□□□□ -0.3
CDK11A-208ENST00000404249 UBE2D1P51668 147 aa13.15□□□□□ -0.3
CDK11A-208ENST00000404249 TSPEAR-AS2P59090 65 aa13.15□□□□□ -0.3
CDK11A-208ENST00000404249 RHOHQ15669 191 aa13.15□□□□□ -0.3
CDK11A-208ENST00000404249 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
CDK11A-208ENST00000404249 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
CDK11A-208ENST00000404249 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.3
CDK11A-208ENST00000404249 DOPEY1Q5JWR5 2465 aa13.15□□□□□ -0.3
CDK11A-208ENST00000404249 A0A0J9YY99 117 aa13.15□□□□□ -0.3
CDK11A-208ENST00000404249 GAGE13Q4V321 117 aa13.14□□□□□ -0.31
CDK11A-208ENST00000404249 DUX5Q96PT3 197 aa13.14□□□□□ -0.31
CDK11A-208ENST00000404249 A0A096LNT2 108 aa13.14□□□□□ -0.31
CDK11A-208ENST00000404249 J3QLI3 93 aa13.14□□□□□ -0.31
CDK11A-208ENST00000404249 CELSR2Q9HCU4 2923 aa13.14□□□□□ -0.31
CDK11A-208ENST00000404249 PRO0461Q9UI25 63 aa13.14□□□□□ -0.31
CDK11A-208ENST00000404249 HOXD3P31249 432 aaPredicted RBP13.13□□□□□ -0.31
CDK11A-208ENST00000404249 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
CDK11A-208ENST00000404249 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
CDK11A-208ENST00000404249 TGFAP01135 160 aa13.13□□□□□ -0.31
CDK11A-208ENST00000404249 TRGV11A0A075B6L2 103 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 ELANEP08246 267 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 MAPK1IP1LQ8NDC0 245 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 SH2D6Q7Z4S9 175 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 OPRPNQ99935 248 aaPredicted RBP13.12□□□□□ -0.31
CDK11A-208ENST00000404249 ZNF702PQ9H963 129 aa13.12□□□□□ -0.31
CDK11A-208ENST00000404249 TSPAN13O95857 204 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 ETDBQ3ZM63 59 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 MAP1AP78559 2803 aaPredicted RBP13.11□□□□□ -0.31
CDK11A-208ENST00000404249 P0DMU3 169 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 FAM231AP0DMU4 169 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 FAM231CP0DMU5 169 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
CDK11A-208ENST00000404249 J3QQQ9 107 aa13.1□□□□□ -0.31
CDK11A-208ENST00000404249 C20orf203Q8NBC4 194 aa13.1□□□□□ -0.31
CDK11A-208ENST00000404249 AMELXQ99217 191 aa13.1□□□□□ -0.31
CDK11A-208ENST00000404249 I3L3M4 83 aa13.1□□□□□ -0.31
CDK11A-208ENST00000404249 APOMO95445 188 aa13.1□□□□□ -0.31
CDK11A-208ENST00000404249 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
CDK11A-208ENST00000404249 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
CDK11A-208ENST00000404249 LGALS3P17931 250 aaKnown RBP13.09□□□□□ -0.31
CDK11A-208ENST00000404249 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
CDK11A-208ENST00000404249 USP9XQ93008 2570 aaPredicted RBP13.09□□□□□ -0.31
CDK11A-208ENST00000404249 J3QR89 54 aa13.09□□□□□ -0.31
CDK11A-208ENST00000404249 IGHV3-30P01768 117 aa13.09□□□□□ -0.31
CDK11A-208ENST00000404249 IGHV3-30-5P0DP03 117 aa13.09□□□□□ -0.31
CDK11A-208ENST00000404249 TCTEX1D4Q5JR98 221 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms