RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SRSF2Q01130 221 aaKnown RBP13.58□□□□□ -0.24
SNED1-204ENST00000401884 TRAV8-4A0A0B4J246 113 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 F8W1H4 67 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 TMEM86BQ8N661 226 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 A0A0C4DFX4 3053 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 PAX4O43316 350 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 AZU1P20160 251 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 SPATA12Q7Z6I5 190 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 BOD1L2Q8IYS8 172 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 PRO1854Q9UHT4 67 aa13.57□□□□□ -0.24
SNED1-204ENST00000401884 TAX1BP3O14907 124 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 JMJD1CQ15652 2540 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 CFHR3Q02985 330 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
SNED1-204ENST00000401884 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 C11orf68Q9H3H3 251 aaKnown RBP13.56□□□□□ -0.24
SNED1-204ENST00000401884 CRIP1P50238 77 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 GAGE2BQ13066 116 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 GAGE2EQ4V326 116 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 GAGE2DQ9UEU5 116 aa13.56□□□□□ -0.24
SNED1-204ENST00000401884 ODF1Q14990 250 aa13.55□□□□□ -0.24
SNED1-204ENST00000401884 CRPP02741 224 aa13.55□□□□□ -0.24
SNED1-204ENST00000401884 FXYD2P54710 66 aa13.55□□□□□ -0.24
SNED1-204ENST00000401884 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
SNED1-204ENST00000401884 BPTFQ12830 3046 aa13.55□□□□□ -0.24
SNED1-204ENST00000401884 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
SNED1-204ENST00000401884 TRAV8-3A0A0A6YYJ7 113 aa13.54□□□□□ -0.24
SNED1-204ENST00000401884 RHOHQ15669 191 aa13.54□□□□□ -0.24
SNED1-204ENST00000401884 TSSC4Q9Y5U2 329 aaPredicted RBP13.54□□□□□ -0.24
SNED1-204ENST00000401884 IGLC6P0CF74 106 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 FGF6P10767 208 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 CKS1BP61024 79 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 ZFP2Q6ZN57 461 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 RNF114Q9Y508 228 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 BRCA2P51587 3418 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 EBI3Q14213 229 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 ANAPC13Q9BS18 74 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 CHD9Q3L8U1 2897 aa13.53□□□□□ -0.24
SNED1-204ENST00000401884 K7EMT4 169 aa13.52□□□□□ -0.24
SNED1-204ENST00000401884 GAGE7O76087 117 aa13.52□□□□□ -0.24
SNED1-204ENST00000401884 GAGE12FP0CL80 117 aa13.52□□□□□ -0.24
SNED1-204ENST00000401884 GAGE12GP0CL81 117 aa13.52□□□□□ -0.24
SNED1-204ENST00000401884 GAGE12IP0CL82 117 aa13.52□□□□□ -0.24
SNED1-204ENST00000401884 VWC2LB2RUY7 222 aa13.52□□□□□ -0.24
SNED1-204ENST00000401884 RNASE8Q8TDE3 154 aaKnown RBP13.52□□□□□ -0.24
SNED1-204ENST00000401884 SLURP1P55000 103 aa13.52□□□□□ -0.25
SNED1-204ENST00000401884 TP73-AS1Q9UF72 201 aa13.52□□□□□ -0.25
SNED1-204ENST00000401884 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.25
SNED1-204ENST00000401884 IGLV2-11P01706 119 aa13.51□□□□□ -0.25
SNED1-204ENST00000401884 Q8N1Y9 231 aa13.51□□□□□ -0.25
SNED1-204ENST00000401884 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
SNED1-204ENST00000401884 LAMA2P24043 3122 aaKnown RBP13.51□□□□□ -0.25
SNED1-204ENST00000401884 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
SNED1-204ENST00000401884 LEPROTO15243 131 aa13.51□□□□□ -0.25
SNED1-204ENST00000401884 SPINK8P0C7L1 97 aa13.5□□□□□ -0.25
SNED1-204ENST00000401884 GATD1Q8NB37 220 aa13.5□□□□□ -0.25
SNED1-204ENST00000401884 ZFAND6Q6FIF0 208 aa13.5□□□□□ -0.25
SNED1-204ENST00000401884 HIGD1BQ9P298 99 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 IGLL5B9A064 214 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 LINC00310P59036 64 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 A0A0J9YXV3 536 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 C19orf84I3L1E1 186 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 APRG1Q8IVJ8 170 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 U3KQE9 123 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 PPDPFLQ8WWR9 84 aa13.49□□□□□ -0.25
SNED1-204ENST00000401884 PKD1L2Q7Z442 2459 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 IGHV4OR15-8A0A075B7B6 117 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 A0A087WW49 117 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 A6NDX4 124 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 PRB1P04280 392 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 JPT2Q9H910 190 aa13.48□□□□□ -0.25
SNED1-204ENST00000401884 ZFAND3Q9H8U3 227 aa13.47□□□□□ -0.25
SNED1-204ENST00000401884 TNFRSF13BO14836 293 aaPredicted RBP13.47□□□□□ -0.25
SNED1-204ENST00000401884 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.47□□□□□ -0.25
SNED1-204ENST00000401884 IGKV2-29A2NJV5 120 aaPredicted RBP13.47□□□□□ -0.25
SNED1-204ENST00000401884 C11orf71Q6IPW1 123 aa13.47□□□□□ -0.25
SNED1-204ENST00000401884 TRAV12-1A0A0B4J245 112 aa13.47□□□□□ -0.25
SNED1-204ENST00000401884 SMAD5-AS1Q9Y6J3 95 aa13.47□□□□□ -0.25
SNED1-204ENST00000401884 MTORP42345 2549 aa13.46□□□□□ -0.25
SNED1-204ENST00000401884 MED14OSP0DP75 135 aa13.46□□□□□ -0.25
SNED1-204ENST00000401884 TEX48A0A1B0GUV7 120 aa13.46□□□□□ -0.25
SNED1-204ENST00000401884 BAALCQ8WXS3 180 aa13.46□□□□□ -0.25
SNED1-204ENST00000401884 TOMM6Q96B49 74 aa13.45□□□□□ -0.26
SNED1-204ENST00000401884 IGF1P05019 195 aa13.45□□□□□ -0.26
SNED1-204ENST00000401884 S100A7L2Q5SY68 101 aa13.45□□□□□ -0.26
SNED1-204ENST00000401884 SH2D6Q7Z4S9 175 aa13.45□□□□□ -0.26
SNED1-204ENST00000401884 MDFICQ9P1T7 246 aa13.45□□□□□ -0.26
SNED1-204ENST00000401884 GAGE6Q13070 117 aa13.45□□□□□ -0.26
SNED1-204ENST00000401884 SPAG8Q99932 426 aaPredicted RBP13.45□□□□□ -0.26
SNED1-204ENST00000401884 GAGE12HA6NDE8 117 aa13.44□□□□□ -0.26
SNED1-204ENST00000401884 SS18Q15532 418 aa13.44□□□□□ -0.26
SNED1-204ENST00000401884 CCL24O00175 119 aa13.44□□□□□ -0.26
SNED1-204ENST00000401884 SLC25A20O43772 301 aa13.44□□□□□ -0.26
SNED1-204ENST00000401884 C11orf86A6NJI1 115 aa13.43□□□□□ -0.26
SNED1-204ENST00000401884 E9PLD3 99 aa13.43□□□□□ -0.26
SNED1-204ENST00000401884 CFC1BP0CG36 223 aa13.43□□□□□ -0.26
SNED1-204ENST00000401884 CFC1P0CG37 223 aa13.43□□□□□ -0.26
SNED1-204ENST00000401884 PFN2P35080 140 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms