RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 PRB1P04280 392 aa14.11□□□□□ -0.15
USP48-204ENST00000400301 AMTNQ6UX39 209 aa14.11□□□□□ -0.15
USP48-204ENST00000400301 TRAV8-2A0A0B4J237 113 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 TRGV4A0A0C4DH28 118 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 A0A1W2PPR1 153 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 ETDBQ3ZM63 59 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 RNF185Q96GF1 192 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 C20orf173Q96LM9 149 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 SIGMAR1Q99720 223 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 U3KQK5 164 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 GPHB5Q86YW7 130 aa14.1□□□□□ -0.15
USP48-204ENST00000400301 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.09□□□□□ -0.15
USP48-204ENST00000400301 F8W735 103 aaPredicted RBP14.09□□□□□ -0.15
USP48-204ENST00000400301 PRORYQ9H606 182 aa14.09□□□□□ -0.15
USP48-204ENST00000400301 RHODO00212 210 aa14.09□□□□□ -0.15
USP48-204ENST00000400301 GATD1Q8NB37 220 aa14.09□□□□□ -0.15
USP48-204ENST00000400301 JPT2Q9H910 190 aa14.09□□□□□ -0.15
USP48-204ENST00000400301 H3BMG7 143 aa14.09□□□□□ -0.15
USP48-204ENST00000400301 RPL35AP18077 110 aaKnown RBP14.08□□□□□ -0.16
USP48-204ENST00000400301 ABCA2Q9BZC7 2435 aa14.08□□□□□ -0.16
USP48-204ENST00000400301 IGHV3-38A0A0C4DH36 116 aa14.08□□□□□ -0.16
USP48-204ENST00000400301 SLURP1P55000 103 aa14.08□□□□□ -0.16
USP48-204ENST00000400301 ZFP2Q6ZN57 461 aa14.08□□□□□ -0.16
USP48-204ENST00000400301 C11orf21Q9P2W6 132 aa14.08□□□□□ -0.16
USP48-204ENST00000400301 J3QQQ9 107 aa14.08□□□□□ -0.16
USP48-204ENST00000400301 IGHV4OR15-8A0A075B7B6 117 aa14.07□□□□□ -0.16
USP48-204ENST00000400301 A0A087WW49 117 aa14.07□□□□□ -0.16
USP48-204ENST00000400301 RPL39P62891 51 aaKnown RBP14.07□□□□□ -0.16
USP48-204ENST00000400301 Q8N1Y9 231 aa14.07□□□□□ -0.16
USP48-204ENST00000400301 GTSF1LQ9H1H1 148 aa14.07□□□□□ -0.16
USP48-204ENST00000400301 HIGD1BQ9P298 99 aa14.07□□□□□ -0.16
USP48-204ENST00000400301 ADARB2-AS1A8MUL3 147 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 LRRK2Q5S007 2527 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 ZFYVE26Q68DK2 2539 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 GAS8-AS1O95177 125 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 TRAV13-1A0A0B4J241 112 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 MED14OSP0DP75 135 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 ZFAND2AQ8N6M9 145 aa14.06□□□□□ -0.16
USP48-204ENST00000400301 TOMM6Q96B49 74 aa14.05□□□□□ -0.16
USP48-204ENST00000400301 TRAV12-1A0A0B4J245 112 aa14.05□□□□□ -0.16
USP48-204ENST00000400301 CLPSL1A2RUU4 121 aa14.05□□□□□ -0.16
USP48-204ENST00000400301 RNASE13Q5GAN3 156 aaKnown RBP14.05□□□□□ -0.16
USP48-204ENST00000400301 BAALCQ8WXS3 180 aa14.05□□□□□ -0.16
USP48-204ENST00000400301 CHCHD5Q9BSY4 110 aa14.05□□□□□ -0.16
USP48-204ENST00000400301 M0R2P5 195 aa14.04□□□□□ -0.16
USP48-204ENST00000400301 OR13C6PQ8NH95 151 aa14.04□□□□□ -0.16
USP48-204ENST00000400301 RHOHQ15669 191 aa14.04□□□□□ -0.16
USP48-204ENST00000400301 MDFICQ9P1T7 246 aa14.04□□□□□ -0.16
USP48-204ENST00000400301 RASL10AQ92737 203 aa14.04□□□□□ -0.16
USP48-204ENST00000400301 IGLL5B9A064 214 aa14.02□□□□□ -0.16
USP48-204ENST00000400301 HIVEP2P31629 2446 aa14.02□□□□□ -0.16
USP48-204ENST00000400301 F8W1H4 67 aa14.02□□□□□ -0.16
USP48-204ENST00000400301 ZNRF2Q8NHG8 242 aa14.02□□□□□ -0.16
USP48-204ENST00000400301 IGKV2D-26A0A0A0MRZ7 120 aa14.02□□□□□ -0.17
USP48-204ENST00000400301 A0A0J9YX75 114 aa14.02□□□□□ -0.17
USP48-204ENST00000400301 CMC4P56277 68 aaPredicted RBP14.02□□□□□ -0.17
USP48-204ENST00000400301 IGHG4P01861 327 aa14.01□□□□□ -0.17
USP48-204ENST00000400301 APRG1Q8IVJ8 170 aa14.01□□□□□ -0.17
USP48-204ENST00000400301 ZNF625Q96I27 306 aaPredicted RBP14.01□□□□□ -0.17
USP48-204ENST00000400301 PRR9Q5T870 116 aa14.01□□□□□ -0.17
USP48-204ENST00000400301 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
USP48-204ENST00000400301 Q6ZQT7 251 aa14.01□□□□□ -0.17
USP48-204ENST00000400301 TRBV7-9A0A0J9YWB2 115 aa14.01□□□□□ -0.17
USP48-204ENST00000400301 POLQO75417 2590 aa14□□□□□ -0.17
USP48-204ENST00000400301 GAGE12JA6NER3 117 aa14□□□□□ -0.17
USP48-204ENST00000400301 AZU1P20160 251 aa14□□□□□ -0.17
USP48-204ENST00000400301 GAGE4Q13068 117 aa14□□□□□ -0.17
USP48-204ENST00000400301 GAGE5Q13069 117 aa14□□□□□ -0.17
USP48-204ENST00000400301 REV3LO60673 3130 aa14□□□□□ -0.17
USP48-204ENST00000400301 MGAQ8IWI9 3026 aa14□□□□□ -0.17
USP48-204ENST00000400301 C9JAW5 83 aa14□□□□□ -0.17
USP48-204ENST00000400301 DNAL4O96015 105 aa14□□□□□ -0.17
USP48-204ENST00000400301 NDUFA12Q9UI09 145 aa14□□□□□ -0.17
USP48-204ENST00000400301 C11orf86A6NJI1 115 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 Q6ZS46 218 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 PRO1854Q9UHT4 67 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 C2orf91Q6ZV80 131 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 SPEGQ15772 3267 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 A0A0J9YXV3 536 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 A0A1B0GV72 72 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 E9PLD3 99 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 CFHR3Q02985 330 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 DEFB113Q30KQ7 82 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 C10orf99Q6UWK7 81 aa13.99□□□□□ -0.17
USP48-204ENST00000400301 CNFNQ9BYD5 112 aa13.98□□□□□ -0.17
USP48-204ENST00000400301 ABCA12Q86UK0 2595 aa13.98□□□□□ -0.17
USP48-204ENST00000400301 PRIMA1Q86XR5 153 aa13.98□□□□□ -0.17
USP48-204ENST00000400301 TSSC4Q9Y5U2 329 aaPredicted RBP13.98□□□□□ -0.17
USP48-204ENST00000400301 TMEM89A2RUT3 159 aa13.97□□□□□ -0.17
USP48-204ENST00000400301 TTC32Q5I0X7 151 aa13.97□□□□□ -0.17
USP48-204ENST00000400301 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
USP48-204ENST00000400301 FGF6P10767 208 aa13.97□□□□□ -0.17
USP48-204ENST00000400301 C1QTNF4Q9BXJ3 329 aa13.97□□□□□ -0.17
USP48-204ENST00000400301 NRACQ8N912 160 aa13.97□□□□□ -0.17
USP48-204ENST00000400301 TRBV20-1A0A075B6N2 111 aa13.96□□□□□ -0.17
USP48-204ENST00000400301 U3KQE9 123 aa13.96□□□□□ -0.17
USP48-204ENST00000400301 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.96□□□□□ -0.17
USP48-204ENST00000400301 IGKV2-29A2NJV5 120 aaPredicted RBP13.96□□□□□ -0.17
USP48-204ENST00000400301 TEX48A0A1B0GUV7 120 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 244.7 ms