RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CYSLTR1Q9Y271 337 aa8.86□□□□□ -0.99
COL25A1-202ENST00000399127 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
COL25A1-202ENST00000399127 MT-ATP8P03928 68 aa8.86□□□□□ -0.99
COL25A1-202ENST00000399127 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
COL25A1-202ENST00000399127 C20orf78Q9BR46 151 aa8.86□□□□□ -0.99
COL25A1-202ENST00000399127 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
COL25A1-202ENST00000399127 IGHV4OR15-8A0A075B7B6 117 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 A0A087WW49 117 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 FGF6P10767 208 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 C18orf65Q6ZTR6 163 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 SPXQ9BT56 116 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 HECTD1Q9ULT8 2610 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 A0A096LNJ9 63 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 TRAV26-2A0A0B4J265 109 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 F8W1H4 67 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 SPANXN1Q5VSR9 72 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 DCANP1Q8TF63 244 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 MAP1LC3CQ9BXW4 147 aa8.85□□□□□ -0.99
COL25A1-202ENST00000399127 K7EMT4 169 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 ZNF688P0C7X2 276 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 RAX2Q96IS3 184 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 IGKV3-20P01619 116 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 C18orf15Q96N68 181 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 AGRNO00468 2067 aa8.84□□□□□ -0.99
COL25A1-202ENST00000399127 M0R381 172 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 LGALS1P09382 135 aaKnown RBP8.83□□□□□ -1
COL25A1-202ENST00000399127 HOXD3P31249 432 aaPredicted RBP8.83□□□□□ -1
COL25A1-202ENST00000399127 ANXA2RQ3ZCQ2 193 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 PSMG4Q5JS54 123 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 LENEPQ9Y5L5 61 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 TRAV21A0A0B4J279 112 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 DUX3Q96PT4 197 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 ZNF747Q9BV97 191 aa8.83□□□□□ -1
COL25A1-202ENST00000399127 TMEM89A2RUT3 159 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 GNRH2O43555 120 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 TNFRSF6BO95407 300 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 S100A4P26447 101 aaKnown RBP8.82□□□□□ -1
COL25A1-202ENST00000399127 KHDC1LQ5JSQ8 128 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 SYT8Q8NBV8 401 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 TM2D2Q9BX73 214 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 ELANEP08246 267 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 XGP55808 180 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 KRTAP1-1Q07627 177 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 Q6ZUT4 128 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 SMR3AQ99954 134 aa8.82□□□□□ -1
COL25A1-202ENST00000399127 SMIM13P0DJ93 91 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 SLURP1P55000 103 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 LINC01545Q5VT33 79 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 TEX29Q8N6K0 151 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 FAM19A4Q96LR4 140 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 UBE2E2Q96LR5 201 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 WNK1Q9H4A3 2382 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 MYOZ3Q8TDC0 251 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
COL25A1-202ENST00000399127 NOTCH2Q04721 2471 aa8.8□□□□□ -1
COL25A1-202ENST00000399127 TRAV12-3A0A0B4J271 114 aa8.8□□□□□ -1
COL25A1-202ENST00000399127 ASIPP42127 132 aa8.8□□□□□ -1
COL25A1-202ENST00000399127 PHLDA3Q9Y5J5 127 aa8.8□□□□□ -1
COL25A1-202ENST00000399127 TRAV12-2A0A075B6T6 113 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 H3BMG7 143 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 M0QXV9 152 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 HBDP02042 147 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 OR9G4Q8NGQ1 327 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 K7ERJ3 54 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 NHLRC4P0CG21 123 aaPredicted RBP8.79□□□□□ -1
COL25A1-202ENST00000399127 FHL3Q13643 280 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 C14orf178Q8N769 122 aaPredicted RBP8.79□□□□□ -1
COL25A1-202ENST00000399127 C11orf44Q8N8P7 122 aa8.79□□□□□ -1
COL25A1-202ENST00000399127 LEPP41159 167 aa8.78□□□□□ -1
COL25A1-202ENST00000399127 TCTAP57738 103 aa8.78□□□□□ -1
COL25A1-202ENST00000399127 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
COL25A1-202ENST00000399127 MUC4Q99102 2169 aa8.78□□□□□ -1
COL25A1-202ENST00000399127 A0A087WX48 190 aa8.78□□□□□ -1
COL25A1-202ENST00000399127 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
COL25A1-202ENST00000399127 CACNG7P62955 275 aa8.78□□□□□ -1
COL25A1-202ENST00000399127 APRG1Q8IVJ8 170 aa8.78□□□□□ -1
COL25A1-202ENST00000399127 IGHV4-4A0A075B6R2 117 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 DNAJC9-AS1A6NH13 148 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 KLLNB2CW77 178 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 K7EQG2 157 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 APOMO95445 188 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 RNF152Q8N8N0 203 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 NRACQ8N912 160 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 PPDPFQ9H3Y8 114 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 CCDC179H3BU77 68 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 LGALS9O00182 355 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 FXYD2P54710 66 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 FOXI1Q12951 378 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 FAM159AQ6UWV7 190 aa8.77□□□□□ -1.01
COL25A1-202ENST00000399127 A0A0J9YX75 114 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE12JA6NER3 117 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 PRSS29PA6NIE9 313 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE7O76087 117 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 MGPP08493 103 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms