RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 LINC00173Q6ZV60 143 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 IGF1P05019 195 aa10.91□□□□□ -0.66
PCDHGA11-201ENST00000398587 SORL1Q92673 2214 aa10.91□□□□□ -0.66
PCDHGA11-201ENST00000398587 C9JAW5 83 aa10.91□□□□□ -0.66
PCDHGA11-201ENST00000398587 TRAV25A0A0B4J276 109 aa10.9□□□□□ -0.66
PCDHGA11-201ENST00000398587 ADAMTSL5Q6ZMM2 481 aa10.9□□□□□ -0.66
PCDHGA11-201ENST00000398587 MLST8Q9BVC4 326 aa10.9□□□□□ -0.66
PCDHGA11-201ENST00000398587 IGHG4P01861 327 aa10.9□□□□□ -0.66
PCDHGA11-201ENST00000398587 CEND1Q8N111 149 aa10.9□□□□□ -0.66
PCDHGA11-201ENST00000398587 Q8N1Y9 231 aa10.9□□□□□ -0.66
PCDHGA11-201ENST00000398587 DNAJC30Q96LL9 226 aa10.89□□□□□ -0.67
PCDHGA11-201ENST00000398587 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
PCDHGA11-201ENST00000398587 TRAV8-3A0A0A6YYJ7 113 aa10.89□□□□□ -0.67
PCDHGA11-201ENST00000398587 DEFB1P60022 68 aa10.89□□□□□ -0.67
PCDHGA11-201ENST00000398587 A0A1B0GXF2 115 aa10.89□□□□□ -0.67
PCDHGA11-201ENST00000398587 PCP2Q8IVA1 136 aa10.89□□□□□ -0.67
PCDHGA11-201ENST00000398587 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 RNASE13Q5GAN3 156 aaKnown RBP10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 ZFP2Q6ZN57 461 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 LRRC75A-AS1Q8N1F1 130 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 PFN2P35080 140 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 LINC00322Q6ZN03 302 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 A0A0J9YX75 114 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 TDRG1Q3Y452 100 aa10.88□□□□□ -0.67
PCDHGA11-201ENST00000398587 TMEM61Q8N0U2 210 aa10.87□□□□□ -0.67
PCDHGA11-201ENST00000398587 ANKRD39Q53RE8 183 aa10.87□□□□□ -0.67
PCDHGA11-201ENST00000398587 USP9XQ93008 2570 aaPredicted RBP10.87□□□□□ -0.67
PCDHGA11-201ENST00000398587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 IGKV2-29A2NJV5 120 aaPredicted RBP10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 C4orf3Q8WVX3 66 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 C16orf74Q96GX8 76 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 TLN2Q9Y4G6 2542 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 MBD6Q96DN6 1003 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 SPINK8P0C7L1 97 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 MYCNOSP40205 109 aa10.86□□□□□ -0.67
PCDHGA11-201ENST00000398587 A0A1W2PPM0 123 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 K7EP34 96 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 NPSP0C0P6 89 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 ARHGAP32A7KAX9 2087 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 SPTBN4Q9H254 2564 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 ANGP03950 147 aaKnown RBP10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 FGF6P10767 208 aa10.85□□□□□ -0.67
PCDHGA11-201ENST00000398587 PSCAO43653 123 aa10.84□□□□□ -0.67
PCDHGA11-201ENST00000398587 LAMTOR3Q9UHA4 124 aa10.84□□□□□ -0.67
PCDHGA11-201ENST00000398587 USP9YO00507 2555 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA11-201ENST00000398587 C12orf74Q32Q52 190 aa10.84□□□□□ -0.67
PCDHGA11-201ENST00000398587 OCIAD2Q56VL3 154 aa10.84□□□□□ -0.67
PCDHGA11-201ENST00000398587 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
PCDHGA11-201ENST00000398587 A0A096LPF7 62 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 TANC2Q9HCD6 1990 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 TRAV12-1A0A0B4J245 112 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 CLPSL1A2RUU4 121 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 COL5A1P20908 1838 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 ATG2AQ2TAZ0 1938 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
PCDHGA11-201ENST00000398587 F8W1H4 67 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 K7ERJ3 54 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 Q6YL49 198 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 K7EQD1 137 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 Q8N6K4 173 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 SCRT2Q9NQ03 307 aa10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
PCDHGA11-201ENST00000398587 K7EP13 123 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 TIMM17AQ99595 171 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 DNAJC9-AS1A6NH13 148 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 NXPH4O95158 308 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 PIFOQ8TCI5 191 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 CHD8Q9HCK8 2581 aa10.81□□□□□ -0.68
PCDHGA11-201ENST00000398587 A0A0J9YY99 117 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 ANAPC13Q9BS18 74 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 TOMM6Q96B49 74 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 RPL39P62891 51 aaKnown RBP10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 K7EQG2 157 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 LGALS9O00182 355 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 ODF3Q96PU9 254 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 GTSF1LQ9H1H1 148 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 Q9H8V8 135 aa10.8□□□□□ -0.68
PCDHGA11-201ENST00000398587 PPDPFLQ8WWR9 84 aa10.79□□□□□ -0.68
PCDHGA11-201ENST00000398587 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
PCDHGA11-201ENST00000398587 TRAV13-2A0A0B4J235 113 aa10.79□□□□□ -0.68
PCDHGA11-201ENST00000398587 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
PCDHGA11-201ENST00000398587 ATP6V0E2Q8NHE4 81 aa10.79□□□□□ -0.68
PCDHGA11-201ENST00000398587 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms