RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FXYD5Q96DB9 178 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 ZNF355PQ9NSJ1 428 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 USP9XQ93008 2570 aaPredicted RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 INS-IGF2F8WCM5 200 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 SAA1P0DJI8 122 aaPredicted RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 RNASE2P10153 161 aaKnown RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 NXT2Q9NPJ8 142 aaKnown RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 SLC25A15Q9Y619 301 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 FRMD6-AS1P0C7T7 363 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 CGB3P0DN86 165 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 CGB7P0DN87 165 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 LGALS3P17931 250 aaKnown RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 COL8A2P25067 703 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 MYCNOSP40205 109 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 MDFIQ99750 246 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 CENPEQ02224 2701 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 LRRK2Q5S007 2527 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 NDUFS5O43920 106 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 POLQO75417 2590 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 SPG11Q96JI7 2443 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 LHBP01229 141 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 IGLV2-8P01709 118 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 HERVK_113P61574 105 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 MRPS36P82909 103 aaKnown RBP5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 CFHR3Q02985 330 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 SRSF9Q13242 221 aaKnown RBP eCLIP5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 FAM120AOSQ5T036 256 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 CCL13Q99616 98 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 HIGD1BQ9P298 99 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 UNC79Q9P2D8 2635 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 CMYA5Q8N3K9 4069 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 POLEQ07864 2286 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 TRAV41A0A0B4J266 112 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 HIGD1CA8MV81 97 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 PRSS3P2Q8NHM4 247 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 TMEM158Q8WZ71 300 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 OVOL2Q9BRP0 275 aa5.04□□□□□ -1.6
TM9SF4-202ENST00000398022 IGKV1OR2-108A0A075B7D4 117 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 TCRBV4S1A1TA0A5B7 111 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 IGKV1-16P04430 117 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 HBBP68871 147 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 OR8A1Q8NGG7 326 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 SLC25A2Q9BXI2 301 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 CCL8P80075 99 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 PSMG4Q5JS54 123 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 FP248Q71RG6 208 aaPredicted RBP5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 PSMG3-AS1Q96PY0 264 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 CHAC1Q9BUX1 264 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 NDUFA4L2Q9NRX3 87 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 F5H697 171 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 NDUFB3O43676 98 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 C1orf229Q6ZS94 237 aaPredicted RBP5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 ZNF329Q86UD4 541 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 FDCSPQ8NFU4 85 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 FAM167A-AS1Q96KT0 104 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 GAFA1Q96PS6 74 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 PRR25Q96S07 402 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 LINC00574Q9H8X3 128 aa5.03□□□□□ -1.6
TM9SF4-202ENST00000398022 CCDC168Q8NDH2 2452 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 NDUFS7O75251 213 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 FAM216BQ8N7L0 139 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM167AQ8TBQ9 72 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 H1FXQ92522 213 aaKnown RBP5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 RPP21Q9H633 154 aaKnown RBP5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 NHP2Q9NX24 153 aaKnown RBP5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 EPDR1Q9UM22 224 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 MOB4Q9Y3A3 225 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 ABCA4P78363 2273 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 IGLV3-9A0A075B6K5 115 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 IGHV1-24A0A0C4DH33 117 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 TIMM23O14925 209 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 UBE2L6O14933 153 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 RBMY1CP0DJD4 496 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNF833PQ6ZTB9 187 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 CHCHD1Q96BP2 118 aaKnown RBP5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 TANC2Q9HCD6 1990 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 DSCAMO60469 2012 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM75Q8N9X5 138 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 CCL17Q92583 94 aa5.02□□□□□ -1.61
TM9SF4-202ENST00000398022 FAM168AQ92567 244 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 IGHV1-46P01743 117 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 FXYD2P54710 66 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 PIK3CD-AS1Q5SR53 167 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM190Q8WZ59 177 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 PGLYRP4Q96LB8 373 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 MSMPQ1L6U9 139 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 SERP2Q8N6R1 65 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNF492Q9P255 531 aa5.01□□□□□ -1.61
TM9SF4-202ENST00000398022 DSCAML1Q8TD84 2053 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
TM9SF4-202ENST00000398022 EFNA4P52798 201 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 UPK3BQ9BT76 320 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 GFRA4Q9GZZ7 299 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNF73O43830 326 aaPredicted RBP5□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNF137PP52743 207 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 MORN5Q5VZ52 161 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 TRGV9Q99603 122 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 K7ERJ3 54 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 RUSC1-AS1Q66K80 236 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 C6orf223Q8N319 242 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 547.9 ms