RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SAA4P35542 130 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 RPL11P62913 178 aaKnown RBP3.85□□□□□ -1.79
SSR1-202ENST00000397511 PVRIGQ6DKI7 326 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 IL17RELQ6ZVW7 336 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 PRR25Q96S07 402 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 LINC01587Q99440 93 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 TMEM14CQ9P0S9 112 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 ABCA12Q86UK0 2595 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 MXRA5Q9NR99 2828 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 H7C1H1 209 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 J3KT08 172 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 LINC00694P0DN24 101 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 LY6EQ16553 131 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 NDUFA11Q86Y39 141 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 C3orf56Q8N813 242 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 Q8N8P6 123 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 LY6G5BQ8NDX9 201 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 ABCA2Q9BZC7 2435 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 LRRK2Q5S007 2527 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 F8VRH5 84 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 DUSP14O95147 198 aaKnown RBP3.84□□□□□ -1.79
SSR1-202ENST00000397511 IGHV3-11P01762 117 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 Q8N1Y9 231 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 NTN5Q8WTR8 489 aaPredicted RBP3.84□□□□□ -1.79
SSR1-202ENST00000397511 ODF3Q96PU9 254 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 NBPF19A0A087WUL8 3843 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 FBN2P35556 2912 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 RPL7P18124 248 aaKnown RBP3.84□□□□□ -1.79
SSR1-202ENST00000397511 Q8N9W7 124 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 NPBQ8NG41 125 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 OR13C6PQ8NH95 151 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 CHCHD5Q9BSY4 110 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 AGRNO00468 2067 aa3.84□□□□□ -1.79
SSR1-202ENST00000397511 MYO9AB2RTY4 2548 aa3.84□□□□□ -1.8
SSR1-202ENST00000397511 IGSF10Q6WRI0 2623 aa3.84□□□□□ -1.8
SSR1-202ENST00000397511 PIEZO1Q92508 2521 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 TRAV12-1A0A0B4J245 112 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 ODF3BA8MYP8 253 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 C19orf84I3L1E1 186 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 IGF1P05019 195 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 CD7P09564 240 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 KLRB1Q12918 225 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 LAGE3Q14657 143 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 C9orf153Q5TBE3 101 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 KLK15Q9H2R5 256 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 SPANXCQ9NY87 97 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 NPFFO15130 113 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 NF1P21359 2839 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 LYPD1Q8N2G4 141 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 PRO1854Q9UHT4 67 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 NIPBLQ6KC79 2804 aaeCLIP3.83□□□□□ -1.8
SSR1-202ENST00000397511 PTPN13Q12923 2485 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 NDUFA7O95182 113 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 TRBV12-3P01733 135 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 TRGV3P03979 118 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
SSR1-202ENST00000397511 EMP1P54849 157 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 C11orf71Q6IPW1 123 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 FAM19A5Q7Z5A7 132 aaPredicted RBP3.83□□□□□ -1.8
SSR1-202ENST00000397511 RNF5Q99942 180 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 SPANXDQ9BXN6 97 aa3.83□□□□□ -1.8
SSR1-202ENST00000397511 BEX4Q9NWD9 120 aaPredicted RBP3.83□□□□□ -1.8
SSR1-202ENST00000397511 SONP18583 2426 aaKnown RBP3.82□□□□□ -1.8
SSR1-202ENST00000397511 LOC107984640A0A0U1RRK4 108 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 A0A1B0GX51 115 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 H3BMM0 161 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 M0R1W7 72 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 ATXN8Q156A1 80 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 C11orf21Q9P2W6 132 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 TEX15Q9BXT5 2789 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 ANKRD17O75179 2603 aaKnown RBP3.82□□□□□ -1.8
SSR1-202ENST00000397511 F6UB75 175 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 BUB3O43684 328 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 CFC1BP0CG36 223 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 CFC1P0CG37 223 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 ZNF56Q15929 161 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 PLEKHB2Q96CS7 222 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 CCDC140Q96MF4 163 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 DUX5Q96PT3 197 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 AGPAT4-IT1Q9H0P7 198 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 IGLV2-18A0A075B6J9 118 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 TRBV7-7A0A0K0K1E9 115 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 M0R2P5 195 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 M0R381 172 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 LGALS9O00182 355 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 IGLC6P0CF74 106 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 SLC25A16P16260 332 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 EDN2P20800 178 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 UNQ9165/PRO28630Q6UXU0 137 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 ZNF575Q86XF7 245 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 C3orf22Q8N5N4 141 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 BAALCQ8WXS3 180 aa3.82□□□□□ -1.8
SSR1-202ENST00000397511 IGKV3D-20A0A0C4DH25 116 aa3.81□□□□□ -1.8
SSR1-202ENST00000397511 TEX49A0A1B0GTD5 131 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms