RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.59
PPM1F-202ENST00000397495 PHLDA3Q9Y5J5 127 aa11.33□□□□□ -0.59
PPM1F-202ENST00000397495 AGRNO00468 2067 aa11.33□□□□□ -0.59
PPM1F-202ENST00000397495 J3KRW8 73 aa11.33□□□□□ -0.6
PPM1F-202ENST00000397495 TSPOP30536 169 aa11.33□□□□□ -0.6
PPM1F-202ENST00000397495 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
PPM1F-202ENST00000397495 MAP6D1Q9H9H5 199 aa11.33□□□□□ -0.6
PPM1F-202ENST00000397495 MRPS16Q9Y3D3 137 aaKnown RBP11.33□□□□□ -0.6
PPM1F-202ENST00000397495 TRRAPQ9Y4A5 3859 aa11.33□□□□□ -0.6
PPM1F-202ENST00000397495 TCAPO15273 167 aa11.32□□□□□ -0.6
PPM1F-202ENST00000397495 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
PPM1F-202ENST00000397495 ZNF124Q15973 351 aa11.32□□□□□ -0.6
PPM1F-202ENST00000397495 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
PPM1F-202ENST00000397495 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
PPM1F-202ENST00000397495 K7EMI3 77 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 CDKN1BP46527 198 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 IFI27L1Q96BM0 104 aa11.31□□□□□ -0.6
PPM1F-202ENST00000397495 PPP1R17O96001 155 aa11.3□□□□□ -0.6
PPM1F-202ENST00000397495 INSL3P51460 131 aa11.3□□□□□ -0.6
PPM1F-202ENST00000397495 LINC00315P59091 139 aa11.3□□□□□ -0.6
PPM1F-202ENST00000397495 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
PPM1F-202ENST00000397495 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
PPM1F-202ENST00000397495 AP1S3Q96PC3 154 aa11.3□□□□□ -0.6
PPM1F-202ENST00000397495 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
PPM1F-202ENST00000397495 MUC4Q99102 2169 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 CD7P09564 240 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
PPM1F-202ENST00000397495 Q6ZN92 141 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 RASL10AQ92737 203 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
PPM1F-202ENST00000397495 OR11H12B2RN74 326 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 HNRNPA3P51991 378 aaKnown RBP11.28□□□□□ -0.6
PPM1F-202ENST00000397495 LAGE3Q14657 143 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 C14orf178Q8N769 122 aaPredicted RBP11.28□□□□□ -0.6
PPM1F-202ENST00000397495 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
PPM1F-202ENST00000397495 TRAV26-2A0A0B4J265 109 aa11.27□□□□□ -0.61
PPM1F-202ENST00000397495 hDV102S1A0JD36 115 aa11.27□□□□□ -0.61
PPM1F-202ENST00000397495 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
PPM1F-202ENST00000397495 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
PPM1F-202ENST00000397495 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
PPM1F-202ENST00000397495 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
PPM1F-202ENST00000397495 SUMO2P61956 95 aaKnown RBP11.26□□□□□ -0.61
PPM1F-202ENST00000397495 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
PPM1F-202ENST00000397495 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
PPM1F-202ENST00000397495 TIMM8BQ9Y5J9 83 aaPredicted RBP11.26□□□□□ -0.61
PPM1F-202ENST00000397495 H3BMM0 161 aa11.26□□□□□ -0.61
PPM1F-202ENST00000397495 ATP5LO75964 103 aa11.25□□□□□ -0.61
PPM1F-202ENST00000397495 FXYD7P58549 80 aa11.25□□□□□ -0.61
PPM1F-202ENST00000397495 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
PPM1F-202ENST00000397495 SMIM17P0DL12 118 aa11.24□□□□□ -0.61
PPM1F-202ENST00000397495 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
PPM1F-202ENST00000397495 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
PPM1F-202ENST00000397495 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
PPM1F-202ENST00000397495 PKD1L1Q8TDX9 2849 aa11.24□□□□□ -0.61
PPM1F-202ENST00000397495 SPRY2O43597 315 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 Q8N1Y9 231 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 PMCHL2Q9BQD1 86 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 TRGV11A0A075B6L2 103 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
PPM1F-202ENST00000397495 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
PPM1F-202ENST00000397495 H0Y8G0 127 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
PPM1F-202ENST00000397495 COX8AP10176 69 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 COL5A1-AS1Q5SY13 56 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 STHQ8IWL8 128 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 C19orf73Q9NVV2 129 aa11.23□□□□□ -0.61
PPM1F-202ENST00000397495 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 ODF1Q14990 250 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 GTSCR1Q86UQ5 136 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 PTH2Q96A98 100 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
PPM1F-202ENST00000397495 GAGE1Q13065 139 aa11.21□□□□□ -0.61
PPM1F-202ENST00000397495 OXLD1Q5BKU9 147 aa11.21□□□□□ -0.61
PPM1F-202ENST00000397495 PIK3CD-AS1Q5SR53 167 aa11.21□□□□□ -0.61
PPM1F-202ENST00000397495 LINC01549A6NIU2 74 aa11.21□□□□□ -0.62
PPM1F-202ENST00000397495 POLR2KP53803 58 aaKnown RBP11.21□□□□□ -0.62
PPM1F-202ENST00000397495 RPL39LQ96EH5 51 aaKnown RBP11.21□□□□□ -0.62
PPM1F-202ENST00000397495 DLEU1O43261 78 aa11.2□□□□□ -0.62
PPM1F-202ENST00000397495 WIPF1O43516 503 aa11.2□□□□□ -0.62
PPM1F-202ENST00000397495 CRYGDP07320 174 aa11.2□□□□□ -0.62
PPM1F-202ENST00000397495 ZNF25P17030 456 aaPredicted RBP11.2□□□□□ -0.62
PPM1F-202ENST00000397495 BATFQ16520 125 aa11.2□□□□□ -0.62
PPM1F-202ENST00000397495 TOMM6Q96B49 74 aa11.2□□□□□ -0.62
PPM1F-202ENST00000397495 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
PPM1F-202ENST00000397495 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
PPM1F-202ENST00000397495 MGPP08493 103 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms