RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 RNASE3P12724 160 aaKnown RBP6.14□□□□□ -1.43
CNTN4-201ENST00000397459 PRR9Q5T870 116 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 CFAP126Q5VTH2 177 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 C14orf178Q8N769 122 aaPredicted RBP6.14□□□□□ -1.43
CNTN4-201ENST00000397459 C20orf173Q96LM9 149 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 TTTY13Q9BZ97 58 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 KIF25-AS1Q9Y6Z4 181 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 SPTAN1Q13813 2472 aaKnown RBP6.14□□□□□ -1.43
CNTN4-201ENST00000397459 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 RNF223E7ERA6 249 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 APOMO95445 188 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 WFDC2Q14508 124 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 MORN3Q6PF18 240 aaPredicted RBP6.14□□□□□ -1.43
CNTN4-201ENST00000397459 ZFP2Q6ZN57 461 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 PPDPFLQ8WWR9 84 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 PIMREGQ9BSJ6 248 aa6.14□□□□□ -1.43
CNTN4-201ENST00000397459 TSSC4Q9Y5U2 329 aaPredicted RBP6.14□□□□□ -1.43
CNTN4-201ENST00000397459 AKAP6Q13023 2319 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 DUSP14O95147 198 aaKnown RBP6.13□□□□□ -1.43
CNTN4-201ENST00000397459 CD7P09564 240 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 RNASE4P34096 147 aaKnown RBP6.13□□□□□ -1.43
CNTN4-201ENST00000397459 ZNF876PQ49A33 203 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 PIK3CD-AS1Q5SR53 167 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 TRPT1Q86TN4 253 aaKnown RBP6.13□□□□□ -1.43
CNTN4-201ENST00000397459 SBSPONQ8IVN8 264 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 SLC25A29Q8N8R3 303 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 PLEKHB2Q96CS7 222 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 BPESC1Q9GZL8 116 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 ZFYVE26Q68DK2 2539 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
CNTN4-201ENST00000397459 A0A0J9YY99 117 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 A6NDX4 124 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 SDHAF1A6NFY7 115 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 GATA3P23771 443 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 C9orf85Q96MD7 179 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 SPAG8Q99932 426 aaPredicted RBP6.13□□□□□ -1.43
CNTN4-201ENST00000397459 RHPN1-AS1Q9BWJ2 59 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 MDFICQ9P1T7 246 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
CNTN4-201ENST00000397459 USP9XQ93008 2570 aaPredicted RBP6.12□□□□□ -1.43
CNTN4-201ENST00000397459 IGLV4-69A0A075B6H9 119 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 LEPROTO15243 131 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 IGLV1-40P01703 118 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 LGALS3P17931 250 aaKnown RBP6.12□□□□□ -1.43
CNTN4-201ENST00000397459 LINC00315P59091 139 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 FOXI1Q12951 378 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 GAGE5Q13069 117 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 GAGE6Q13070 117 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 TEN1Q86WV5 123 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 NDUFA11Q86Y39 141 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 RPL39LQ96EH5 51 aaKnown RBP6.12□□□□□ -1.43
CNTN4-201ENST00000397459 LINC01600Q96MT4 127 aa6.12□□□□□ -1.43
CNTN4-201ENST00000397459 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV3OR16-13A0A075B7E8 117 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV3-74A0A0B4J1X5 117 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 PRB4P10163 310 aaPredicted RBP6.11□□□□□ -1.43
CNTN4-201ENST00000397459 SNRPD3P62318 126 aaKnown RBP6.11□□□□□ -1.43
CNTN4-201ENST00000397459 DOPEY1Q5JWR5 2465 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV3-49A0A0A0MS15 119 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 A8MWV9 139 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 CRYGDP07320 174 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 P0DMU3 169 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 FAM231AP0DMU4 169 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 FAM231CP0DMU5 169 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 ZNF843Q8N446 348 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 KLK15Q9H2R5 256 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
CNTN4-201ENST00000397459 ZNF256Q9Y2P7 627 aaPredicted RBP6.11□□□□□ -1.43
CNTN4-201ENST00000397459 UTP20O75691 2785 aaKnown RBP6.11□□□□□ -1.43
CNTN4-201ENST00000397459 LINC01548A6NM66 108 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV4-39P01824 125 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 UNQ9165/PRO28630Q6UXU0 137 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 PTH2Q96A98 100 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 RNF183Q96D59 192 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 SPANXA1Q9NS26 97 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 PYGO1Q9Y3Y4 419 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 MED13LQ71F56 2210 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 J3QQQ9 107 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV3-30P01768 117 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV3-30-5P0DP03 117 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 DSCR9P59020 149 aa6.1□□□□□ -1.43
CNTN4-201ENST00000397459 RPL11P62913 178 aaKnown RBP6.1□□□□□ -1.43
CNTN4-201ENST00000397459 ZNF462Q96JM2 2506 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 CSMD1Q96PZ7 3565 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 MYO18BQ8IUG5 2567 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 CFHR3Q02985 330 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 VPREB3Q9UKI3 123 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 ERG28Q9UKR5 140 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 IGHV3-16A0A0C4DH30 117 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 F8WDY8 70 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 I3L3M4 83 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 GNRH2O43555 120 aa6.09□□□□□ -1.43
CNTN4-201ENST00000397459 TMEM170BQ5T4T1 132 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms