RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CYB561D1Q8N8Q1 229 aa5.74□□□□□ -1.49
CAPN3-208ENST00000397204 PSG8Q9UQ74 426 aa5.74□□□□□ -1.49
CAPN3-208ENST00000397204 GAGE12JA6NER3 117 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 EIF3GO75821 320 aaKnown RBP eCLIP5.73□□□□□ -1.49
CAPN3-208ENST00000397204 MPC2O95563 127 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 TCRAP04437 139 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 PET100P0DJ07 73 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 LINC00694P0DN24 101 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 PCP4P48539 62 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 H2BFSP57053 126 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 GNG5P63218 68 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 GAGE1Q13065 139 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 GAGE4Q13068 117 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 GAGE5Q13069 117 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 ZFP69Q49AA0 526 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 LINC01620Q4KN68 170 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 SAPCD1Q5SSQ6 148 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 AKAP14Q86UN6 197 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 C5orf17Q8NAS9 161 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 OR10G9Q8NGN4 311 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 OR10G7Q8NGN6 311 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 SGK494Q96LW2 274 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 PARLQ9H300 379 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 URGCP-MRPS24S4R325 110 aa5.73□□□□□ -1.49
CAPN3-208ENST00000397204 IGLV2-8P01709 118 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 SLPIP03973 132 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 S100A4P26447 101 aaKnown RBP5.72□□□□□ -1.49
CAPN3-208ENST00000397204 RAB2AP61019 212 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 FLI1Q01543 452 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-208ENST00000397204 ELOBQ15370 118 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 LGALSLQ3ZCW2 172 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-208ENST00000397204 NIT1Q86X76 327 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 OR2T35Q8NGX2 323 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 LINC00479Q96M42 142 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 CHCHD7Q9BUK0 85 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 SMIM3Q9BZL3 60 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 EPDR1Q9UM22 224 aa5.72□□□□□ -1.49
CAPN3-208ENST00000397204 IGKV2D-24A0A075B6R9 120 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 FABP5P3A8MUU1 101 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 INMT-MINDY4F8WBC2 141 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 HMGB3O15347 200 aaKnown RBP5.71□□□□□ -1.5
CAPN3-208ENST00000397204 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 STAG3L2P0CL84 134 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 STAG3L3P0CL85 134 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 Q0VG73 95 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 UFSP1Q6NVU6 142 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 PRNTQ86SH4 94 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 SLC51BQ86UW2 128 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 TMEM75Q8N9X5 138 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 S100ZQ8WXG8 99 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 SAMD10Q9BYL1 202 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 WFDC1Q9HC57 220 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 IL36BQ9NZH7 164 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 Q9UF83 564 aa5.71□□□□□ -1.5
CAPN3-208ENST00000397204 A0A087WX48 190 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 IGKV3D-20A0A0C4DH25 116 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 XKRY2A2RUG3 117 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 RHODO00212 210 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 ARL14EPLP0DKL9 152 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 GCHFRP30047 84 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 ASIPP42127 132 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 CDC34P49427 236 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-208ENST00000397204 S100A12P80511 92 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 C14orf177Q52M58 125 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 KCNIP4Q6PIL6 250 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 ATRAIDQ6UW56 229 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 C14orf178Q8N769 122 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-208ENST00000397204 OR2G3Q8NGZ4 309 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 RAB24Q969Q5 203 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 UBE2WQ96B02 151 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 MARVELD1Q9BSK0 173 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 JPT2Q9H910 190 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 KLK12Q9UKR0 248 aa5.7□□□□□ -1.5
CAPN3-208ENST00000397204 SSNA1O43805 119 aa5.69□□□□□ -1.5
CAPN3-208ENST00000397204 MBP02144 154 aa5.69□□□□□ -1.5
CAPN3-208ENST00000397204 TAGLN2P37802 199 aaKnown RBP5.69□□□□□ -1.5
CAPN3-208ENST00000397204 SERF2P84101 59 aa5.69□□□□□ -1.5
CAPN3-208ENST00000397204 DNLZQ5SXM8 178 aa5.69□□□□□ -1.5
CAPN3-208ENST00000397204 TRBV10-1A0A0K0K1A3 114 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 A0A1W2PRE2 83 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 UPK1BO75841 260 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 CXorf1O96002 111 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 ARMS2P0C7Q2 107 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 RGS21Q2M5E4 152 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 DNAJC30Q96LL9 226 aa5.68□□□□□ -1.5
CAPN3-208ENST00000397204 PSMG3Q9BT73 122 aaPredicted RBP5.68□□□□□ -1.5
CAPN3-208ENST00000397204 B4DEV8 164 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 KRBOX1C9JBD0 128 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 TMEM262E9PQX1 116 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 RPL37AP61513 92 aaKnown RBP5.67□□□□□ -1.5
CAPN3-208ENST00000397204 RPL36AP83881 106 aaKnown RBP5.67□□□□□ -1.5
CAPN3-208ENST00000397204 DGAT2L7PQ6IED9 249 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 COX8CQ7Z4L0 72 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 OR11H4Q8NGC9 324 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 RPL36ALQ969Q0 106 aaKnown RBP5.67□□□□□ -1.5
CAPN3-208ENST00000397204 SFRP2Q96HF1 295 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms