RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 TMEM61Q8N0U2 210 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 NCKAP5O14513 1909 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 K7EIM0 57 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 K7EMI3 77 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 CASC2Q6XLA1 102 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 GTF3C1Q12789 2109 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 CHD3Q12873 2000 aaKnown RBP13.41□□□□□ -0.26
MCF2L-208ENST00000397030 A0A0J9YXV3 536 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 C7orf33Q8WU49 177 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 DIRC1Q969H9 104 aa13.41□□□□□ -0.26
MCF2L-208ENST00000397030 SIRPDQ9H106 197 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 PPDPFLQ8WWR9 84 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 K7EN84 100 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 FAM19A5Q7Z5A7 132 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-208ENST00000397030 C11orf52Q96A22 123 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 GVINP1Q7Z2Y8 2422 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 C9orf118A6NHY6 69 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 DLEU1O43261 78 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 LINC00269Q8N2A0 174 aa13.4□□□□□ -0.26
MCF2L-208ENST00000397030 NPSP0C0P6 89 aa13.4□□□□□ -0.27
MCF2L-208ENST00000397030 HRCT1Q6UXD1 115 aa13.4□□□□□ -0.27
MCF2L-208ENST00000397030 TMEM263Q8WUH6 116 aaKnown RBP13.4□□□□□ -0.27
MCF2L-208ENST00000397030 PRO0255Q9UI72 69 aa13.4□□□□□ -0.27
MCF2L-208ENST00000397030 UBE2V1Q13404 147 aa13.39□□□□□ -0.27
MCF2L-208ENST00000397030 FAM222AQ5U5X8 452 aa13.39□□□□□ -0.27
MCF2L-208ENST00000397030 H3BMG7 143 aa13.39□□□□□ -0.27
MCF2L-208ENST00000397030 UNQ9165/PRO28630Q6UXU0 137 aa13.39□□□□□ -0.27
MCF2L-208ENST00000397030 LOXL1Q08397 574 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-208ENST00000397030 NTN5Q8WTR8 489 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-208ENST00000397030 MSRB1Q9NZV6 116 aa13.38□□□□□ -0.27
MCF2L-208ENST00000397030 IGKV3D-7A0A0C4DH55 119 aa13.38□□□□□ -0.27
MCF2L-208ENST00000397030 IFITM1P13164 125 aa13.38□□□□□ -0.27
MCF2L-208ENST00000397030 DOCK9Q9BZ29 2069 aa13.38□□□□□ -0.27
MCF2L-208ENST00000397030 TMEM258P61165 79 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 MDFICQ9P1T7 246 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 IGKV1D-37A0A075B6S9 117 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 A0A1W2PNU3 283 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-208ENST00000397030 A6NDX4 124 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 COX8AP10176 69 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
MCF2L-208ENST00000397030 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 CFC1P0CG37 223 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 Q8NA96 180 aa13.37□□□□□ -0.27
MCF2L-208ENST00000397030 WISP2O76076 250 aa13.36□□□□□ -0.27
MCF2L-208ENST00000397030 LRRC75A-AS1Q8N1F1 130 aa13.36□□□□□ -0.27
MCF2L-208ENST00000397030 C9JQL5 133 aa13.36□□□□□ -0.27
MCF2L-208ENST00000397030 ACYP1P07311 99 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 P0DMU3 169 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 FAM231AP0DMU4 169 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 FAM231CP0DMU5 169 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 ADCYAP1P18509 176 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 DYSFO75923 2080 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 FGF23Q9GZV9 251 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-208ENST00000397030 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 LENEPQ9Y5L5 61 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 ADAMTS9Q9P2N4 1935 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 C12orf74Q32Q52 190 aa13.35□□□□□ -0.27
MCF2L-208ENST00000397030 PYY3Q5JQD4 70 aa13.34□□□□□ -0.27
MCF2L-208ENST00000397030 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-208ENST00000397030 TANC1Q9C0D5 1861 aa13.34□□□□□ -0.27
MCF2L-208ENST00000397030 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
MCF2L-208ENST00000397030 PRSS47A8MTI9 375 aa13.34□□□□□ -0.27
MCF2L-208ENST00000397030 ANKRD39Q53RE8 183 aa13.34□□□□□ -0.27
MCF2L-208ENST00000397030 ZNF407Q9C0G0 2248 aa13.33□□□□□ -0.27
MCF2L-208ENST00000397030 C1orf147Q96MC9 270 aaPredicted RBP13.33□□□□□ -0.27
MCF2L-208ENST00000397030 IGF1P05019 195 aa13.33□□□□□ -0.28
MCF2L-208ENST00000397030 REG3AQ06141 175 aa13.33□□□□□ -0.28
MCF2L-208ENST00000397030 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-208ENST00000397030 Q6YL49 198 aa13.33□□□□□ -0.28
MCF2L-208ENST00000397030 TP53TG3Q9ULZ0 132 aa13.33□□□□□ -0.28
MCF2L-208ENST00000397030 FOXI1Q12951 378 aa13.33□□□□□ -0.28
MCF2L-208ENST00000397030 Q6ZTI0 123 aa13.32□□□□□ -0.28
MCF2L-208ENST00000397030 UBE2D3P61077 147 aa13.32□□□□□ -0.28
MCF2L-208ENST00000397030 K7EMT4 169 aa13.32□□□□□ -0.28
MCF2L-208ENST00000397030 NCOR1O75376 2440 aa13.32□□□□□ -0.28
MCF2L-208ENST00000397030 A0A1W2PPM0 123 aa13.31□□□□□ -0.28
MCF2L-208ENST00000397030 COX7BP24311 80 aa13.31□□□□□ -0.28
MCF2L-208ENST00000397030 PCP2Q8IVA1 136 aa13.31□□□□□ -0.28
MCF2L-208ENST00000397030 MIR7-3HGQ8N6C7 128 aa13.31□□□□□ -0.28
MCF2L-208ENST00000397030 F8W1H4 67 aa13.3□□□□□ -0.28
MCF2L-208ENST00000397030 SIP14410 1827 aa13.3□□□□□ -0.28
MCF2L-208ENST00000397030 POU2AF1Q16633 256 aa13.3□□□□□ -0.28
MCF2L-208ENST00000397030 CXCL5P42830 114 aa13.3□□□□□ -0.28
MCF2L-208ENST00000397030 LINC01548A6NM66 108 aa13.3□□□□□ -0.28
MCF2L-208ENST00000397030 C9orf85Q96MD7 179 aa13.3□□□□□ -0.28
MCF2L-208ENST00000397030 SPINK6Q6UWN8 80 aa13.29□□□□□ -0.28
MCF2L-208ENST00000397030 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.288e-7■■■□□ 15.1
MCF2L-208ENST00000397030 WI2-2373I1.2A0A1W2PRP0 233 aa13.29□□□□□ -0.28
MCF2L-208ENST00000397030 K7EP34 96 aa13.29□□□□□ -0.28
MCF2L-208ENST00000397030 PPDPFQ9H3Y8 114 aa13.29□□□□□ -0.28
MCF2L-208ENST00000397030 PKDREJQ9NTG1 2253 aa13.29□□□□□ -0.28
MCF2L-208ENST00000397030 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
MCF2L-208ENST00000397030 TNRC6BQ9UPQ9 1833 aaKnown RBP13.28□□□□□ -0.28
MCF2L-208ENST00000397030 SMR3AQ99954 134 aa13.27□□□□□ -0.28
MCF2L-208ENST00000397030 TMEM89A2RUT3 159 aa13.27□□□□□ -0.28
MCF2L-208ENST00000397030 PLA2G2AP14555 144 aa13.27□□□□□ -0.28
MCF2L-208ENST00000397030 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
MCF2L-208ENST00000397030 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms