RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
TM9SF1-202ENST00000396854 DEFB131AP59861 70 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 CACNG7P62955 275 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 ANKRD39Q53RE8 183 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 EGFEM1PQ0D2K5 195 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 AGPAT4-IT1Q9H0P7 198 aa10.97□□□□□ -0.65
TM9SF1-202ENST00000396854 K7EP13 123 aa10.96□□□□□ -0.65
TM9SF1-202ENST00000396854 C19orf73Q9NVV2 129 aa10.96□□□□□ -0.65
TM9SF1-202ENST00000396854 OR11H12B2RN74 326 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 CD7P09564 240 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 FXYD7P58549 80 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 VAMP3Q15836 100 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 SAMD5Q5TGI4 173 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 NXT2Q9NPJ8 142 aaKnown RBP10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 CBY1Q9Y3M2 126 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.66
TM9SF1-202ENST00000396854 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
TM9SF1-202ENST00000396854 DEFB1P60022 68 aa10.95□□□□□ -0.66
TM9SF1-202ENST00000396854 BOD1L2Q8IYS8 172 aa10.95□□□□□ -0.66
TM9SF1-202ENST00000396854 A0A0J9YX75 114 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 F6UB75 175 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 SEC11AP67812 179 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 GTSCR1Q86UQ5 136 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 OR4C5Q8NGB2 326 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 G3V4G9 280 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 FCER1GP30273 86 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 OR10J6PQ8NGY7 276 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 C11orf21Q9P2W6 132 aa10.94□□□□□ -0.66
TM9SF1-202ENST00000396854 AGRNO00468 2067 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 SIVA1O15304 175 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 SNAI2O43623 268 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 GAS8-AS1O95177 125 aa10.93□□□□□ -0.66
TM9SF1-202ENST00000396854 TRBV7-9A0A0J9YWB2 115 aa10.92□□□□□ -0.66
TM9SF1-202ENST00000396854 CBY3A6NI87 242 aa10.92□□□□□ -0.66
TM9SF1-202ENST00000396854 A8MTW9 85 aa10.92□□□□□ -0.66
TM9SF1-202ENST00000396854 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
TM9SF1-202ENST00000396854 KRTAP10-11P60412 298 aa10.92□□□□□ -0.66
TM9SF1-202ENST00000396854 KNCNA6PVL3 124 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 LEPP41159 167 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 ERASQ7Z444 233 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 FAM19A4Q96LR4 140 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 IGHV4-4A0A075B6R2 117 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 H3BMM0 161 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 Q8N1Y9 231 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 Q8N8P6 123 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 DKK2Q9UBU2 259 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 DNAH3Q8TD57 4116 aa10.91□□□□□ -0.66
TM9SF1-202ENST00000396854 EVI2AP22794 236 aa10.9□□□□□ -0.66
TM9SF1-202ENST00000396854 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
TM9SF1-202ENST00000396854 C7orf71A4D174 169 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 HSD52Q0P140 79 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 ODF1Q14990 250 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 AMMECR1LQ6DCA0 310 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 C18orf15Q96N68 181 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 DNHD1Q96M86 4753 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 KPRPQ5T749 579 aaPredicted RBP10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
TM9SF1-202ENST00000396854 A6NDN8 102 aa10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 AMTNQ6UX39 209 aa10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 STHQ8IWL8 128 aa10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 NRACQ8N912 160 aa10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 RBX1P62877 108 aa10.88□□□□□ -0.67
TM9SF1-202ENST00000396854 H3BRM9 83 aa10.87□□□□□ -0.67
TM9SF1-202ENST00000396854 ATP5LO75964 103 aa10.87□□□□□ -0.67
TM9SF1-202ENST00000396854 NMUP48645 174 aa10.87□□□□□ -0.67
TM9SF1-202ENST00000396854 PRR9Q5T870 116 aa10.87□□□□□ -0.67
TM9SF1-202ENST00000396854 PCP2Q8IVA1 136 aa10.87□□□□□ -0.67
TM9SF1-202ENST00000396854 RBMY1BA6NDE4 496 aaKnown RBP10.86□□□□□ -0.67
TM9SF1-202ENST00000396854 RBMY1EA6NEQ0 496 aaKnown RBP10.86□□□□□ -0.67
TM9SF1-202ENST00000396854 RBMY1DP0C7P1 496 aaKnown RBP10.86□□□□□ -0.67
TM9SF1-202ENST00000396854 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
TM9SF1-202ENST00000396854 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
TM9SF1-202ENST00000396854 PRSS1P07477 247 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 TCTAP57738 103 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 MRAP2Q96G30 205 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 C9orf118A6NHY6 69 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 KLLNB2CW77 178 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 IGKCP01834 107 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 LAGE3Q14657 143 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms