RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 RHPN1-AS1Q9BWJ2 59 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 OOSP1A8MZH6 123 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 COX6B1P14854 86 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 SLC25A16P16260 332 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 ASIPP42127 132 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 SUMO2P61956 95 aaKnown RBP7.03□□□□□ -1.28
NDE1-201ENST00000396354 NRACQ8N912 160 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 MRPL16Q9NX20 251 aaKnown RBP7.03□□□□□ -1.28
NDE1-201ENST00000396354 MUC4Q99102 2169 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 ZNF48Q96MX3 618 aaPredicted RBP7.03□□□□□ -1.28
NDE1-201ENST00000396354 NPFFR1Q9GZQ6 430 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 ITPR2Q14571 2701 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 NPC2P61916 151 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 PSMG4Q5JS54 123 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 CEND1Q8N111 149 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 PTH2Q96A98 100 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 PLEKHB2Q96CS7 222 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 PSMG3-AS1Q96PY0 264 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 CCL19Q99731 98 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 SMIM2Q9BVW6 85 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 KNCNA6PVL3 124 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 ATP5LO75964 103 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 ATP5J2P56134 94 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 ZNF56Q15929 161 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 C10orf105Q8TEF2 133 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 DUX3Q96PT4 197 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
NDE1-201ENST00000396354 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
NDE1-201ENST00000396354 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 RASL10AQ92737 203 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 BEX4Q9NWD9 120 aaPredicted RBP7.01□□□□□ -1.29
NDE1-201ENST00000396354 TP53TG1Q9Y2A0 90 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 A0A1B0GWB2 263 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 PSMB2P49721 201 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 C19orf54Q5BKX5 351 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 UFSP1Q6NVU6 142 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 C11orf44Q8N8P7 122 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 UNC79Q9P2D8 2635 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 SPINK13Q1W4C9 94 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 FAM159AQ6UWV7 190 aa7.01□□□□□ -1.29
NDE1-201ENST00000396354 LINC01549A6NIU2 74 aa7□□□□□ -1.29
NDE1-201ENST00000396354 KRTAP10-9P60411 292 aa7□□□□□ -1.29
NDE1-201ENST00000396354 MOB4Q9Y3A3 225 aa7□□□□□ -1.29
NDE1-201ENST00000396354 A0A087WX48 190 aa7□□□□□ -1.29
NDE1-201ENST00000396354 IGHV1-69DA0A0B4J2H0 117 aa7□□□□□ -1.29
NDE1-201ENST00000396354 IGHV1-69P01742 117 aa7□□□□□ -1.29
NDE1-201ENST00000396354 DEFB136Q30KP8 78 aa7□□□□□ -1.29
NDE1-201ENST00000396354 RAX2Q96IS3 184 aa7□□□□□ -1.29
NDE1-201ENST00000396354 FLNAP21333 2647 aaKnown RBP7□□□□□ -1.29
NDE1-201ENST00000396354 TRBV7-1A0A0A6YYK4 115 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 TRAV21A0A0B4J279 112 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 IGLL5B9A064 214 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 SCGB1C2P0DMR2 95 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 ZFP2Q6ZN57 461 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 GPHB5Q86YW7 130 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
NDE1-201ENST00000396354 FLNBO75369 2602 aaKnown RBP6.99□□□□□ -1.29
NDE1-201ENST00000396354 IGLV2-18A0A075B6J9 118 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 F8VRH5 84 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 H7C1H1 209 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 KLK9Q2XQG4 91 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 MDFICQ9P1T7 246 aa6.99□□□□□ -1.29
NDE1-201ENST00000396354 P0DMU3 169 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 FAM231AP0DMU4 169 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 FAM231CP0DMU5 169 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 CEMP1Q6PRD7 247 aaPredicted RBP6.98□□□□□ -1.29
NDE1-201ENST00000396354 DPH3P1Q9H4G8 78 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 ITPR3Q14573 2671 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 G3V4G9 280 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 AZU1P20160 251 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 RAB9AP51151 201 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 BAALCQ8WXS3 180 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 PIMREGQ9BSJ6 248 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 ZNF580Q9UK33 172 aa6.98□□□□□ -1.29
NDE1-201ENST00000396354 C11orf86A6NJI1 115 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 IGHV4-59P01825 116 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 C9orf139Q6ZV77 190 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 SDHAF1A6NFY7 115 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 PRSS2P07478 247 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
NDE1-201ENST00000396354 RNASE3P12724 160 aaKnown RBP6.97□□□□□ -1.29
NDE1-201ENST00000396354 Q1RN00 199 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 GAGE13Q4V321 117 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 C9orf47Q6ZRZ4 202 aa6.97□□□□□ -1.29
NDE1-201ENST00000396354 HOXA3O43365 443 aaPredicted RBP6.96□□□□□ -1.29
NDE1-201ENST00000396354 PLNP26678 52 aa6.96□□□□□ -1.29
NDE1-201ENST00000396354 SAMD13Q5VXD3 122 aa6.96□□□□□ -1.29
NDE1-201ENST00000396354 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.29
NDE1-201ENST00000396354 A0A096LNT2 108 aa6.96□□□□□ -1.3
NDE1-201ENST00000396354 TRAV2A0A0B4J234 112 aa6.96□□□□□ -1.3
NDE1-201ENST00000396354 PROK1P58294 105 aa6.96□□□□□ -1.3
NDE1-201ENST00000396354 SUMO4Q6EEV6 95 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms