RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CST9LP1Q5W188 147 aa11.96□□□□□ -0.49
CXCL12-204ENST00000395793 OR11H4Q8NGC9 324 aa11.96□□□□□ -0.49
CXCL12-204ENST00000395793 FRZBQ92765 325 aa11.96□□□□□ -0.49
CXCL12-204ENST00000395793 FAM30AQ9NZY2 134 aa11.96□□□□□ -0.49
CXCL12-204ENST00000395793 RHODO00212 210 aa11.95□□□□□ -0.5
CXCL12-204ENST00000395793 PAGE4O60829 102 aa11.95□□□□□ -0.5
CXCL12-204ENST00000395793 KCNRGQ8N5I3 272 aa11.95□□□□□ -0.5
CXCL12-204ENST00000395793 SYT8Q8NBV8 401 aa11.95□□□□□ -0.5
CXCL12-204ENST00000395793 SFRP2Q96HF1 295 aa11.95□□□□□ -0.5
CXCL12-204ENST00000395793 TMEM70Q9BUB7 260 aa11.95□□□□□ -0.5
CXCL12-204ENST00000395793 DNAH8Q96JB1 4490 aa11.94□□□□□ -0.5
CXCL12-204ENST00000395793 M0R381 172 aa11.94□□□□□ -0.5
CXCL12-204ENST00000395793 AKR1C3P42330 323 aa11.94□□□□□ -0.5
CXCL12-204ENST00000395793 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
CXCL12-204ENST00000395793 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
CXCL12-204ENST00000395793 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-204ENST00000395793 LECT2O14960 151 aa11.93□□□□□ -0.5
CXCL12-204ENST00000395793 TPT1P13693 172 aaKnown RBP11.93□□□□□ -0.5
CXCL12-204ENST00000395793 ZNF345Q14585 488 aa11.93□□□□□ -0.5
CXCL12-204ENST00000395793 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
CXCL12-204ENST00000395793 TCEAL7Q9BRU2 100 aa11.93□□□□□ -0.5
CXCL12-204ENST00000395793 TM2D2Q9BX73 214 aa11.93□□□□□ -0.5
CXCL12-204ENST00000395793 A0A087WWC5 75 aa11.92□□□□□ -0.5
CXCL12-204ENST00000395793 A0A1B0GV50 99 aa11.92□□□□□ -0.5
CXCL12-204ENST00000395793 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
CXCL12-204ENST00000395793 RPL19P84098 196 aaKnown RBP11.92□□□□□ -0.5
CXCL12-204ENST00000395793 NIT1Q86X76 327 aa11.92□□□□□ -0.5
CXCL12-204ENST00000395793 FAM213BQ8TBF2 198 aa11.92□□□□□ -0.5
CXCL12-204ENST00000395793 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
CXCL12-204ENST00000395793 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
CXCL12-204ENST00000395793 ZFP82Q8N141 532 aa11.91□□□□□ -0.5
CXCL12-204ENST00000395793 SFT2D1Q8WV19 159 aa11.91□□□□□ -0.5
CXCL12-204ENST00000395793 DMBT1Q9UGM3 2413 aaPredicted RBP11.91□□□□□ -0.5
CXCL12-204ENST00000395793 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
CXCL12-204ENST00000395793 OR10AG1Q8NH19 301 aa11.9□□□□□ -0.5
CXCL12-204ENST00000395793 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.51
CXCL12-204ENST00000395793 UBE2D3P61077 147 aa11.89□□□□□ -0.51
CXCL12-204ENST00000395793 UBE2D2P62837 147 aa11.89□□□□□ -0.51
CXCL12-204ENST00000395793 BAALCQ8WXS3 180 aa11.89□□□□□ -0.51
CXCL12-204ENST00000395793 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
CXCL12-204ENST00000395793 HERC1Q15751 4861 aa11.89□□□□□ -0.51
CXCL12-204ENST00000395793 MYCBP2O75592 4640 aa11.88□□□□□ -0.51
CXCL12-204ENST00000395793 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-204ENST00000395793 ZNF471Q9BX82 626 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-204ENST00000395793 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 HMSDA8MTL9 139 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 UMAD1C9J7I0 102 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 BCL2L11O43521 198 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 TOR2AQ5JU69 321 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 Q6ZSA8 131 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 KLK12Q9UKR0 248 aa11.87□□□□□ -0.51
CXCL12-204ENST00000395793 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
CXCL12-204ENST00000395793 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
CXCL12-204ENST00000395793 C1QBP02746 253 aa11.86□□□□□ -0.51
CXCL12-204ENST00000395793 CXCL1P09341 107 aa11.86□□□□□ -0.51
CXCL12-204ENST00000395793 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
CXCL12-204ENST00000395793 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
CXCL12-204ENST00000395793 BAGE2Q86Y30 109 aa11.86□□□□□ -0.51
CXCL12-204ENST00000395793 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
CXCL12-204ENST00000395793 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
CXCL12-204ENST00000395793 FAM229AH3BQW9 127 aa11.85□□□□□ -0.51
CXCL12-204ENST00000395793 SNAI2O43623 268 aa11.85□□□□□ -0.51
CXCL12-204ENST00000395793 S100A9P06702 114 aaKnown RBP11.85□□□□□ -0.51
CXCL12-204ENST00000395793 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
CXCL12-204ENST00000395793 NEXN-AS1Q8NBZ9 246 aa11.85□□□□□ -0.51
CXCL12-204ENST00000395793 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
CXCL12-204ENST00000395793 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-204ENST00000395793 IGKV2D-24A0A075B6R9 120 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 A0A0D9SG52 128 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 KANTRA0A1W2PQU2 76 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 PFDN1O60925 122 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 DERL1Q9BUN8 251 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 URGCP-MRPS24S4R325 110 aa11.84□□□□□ -0.51
CXCL12-204ENST00000395793 H2AFB1P0C5Y9 115 aa11.83□□□□□ -0.52
CXCL12-204ENST00000395793 RAB4BP61018 213 aa11.83□□□□□ -0.52
CXCL12-204ENST00000395793 CCL20P78556 96 aa11.83□□□□□ -0.52
CXCL12-204ENST00000395793 ZNF56Q15929 161 aa11.83□□□□□ -0.52
CXCL12-204ENST00000395793 ATRAIDQ6UW56 229 aa11.83□□□□□ -0.52
CXCL12-204ENST00000395793 OR5AL1P0C617 328 aa11.82□□□□□ -0.52
CXCL12-204ENST00000395793 TMUB2Q71RG4 321 aa11.82□□□□□ -0.52
CXCL12-204ENST00000395793 RMI2Q96E14 147 aa11.82□□□□□ -0.52
CXCL12-204ENST00000395793 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
CXCL12-204ENST00000395793 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
CXCL12-204ENST00000395793 A0A087WX48 190 aa11.81□□□□□ -0.52
CXCL12-204ENST00000395793 TRBV6-8A0A0A6YYG3 113 aa11.81□□□□□ -0.52
CXCL12-204ENST00000395793 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
CXCL12-204ENST00000395793 C11orf52Q96A22 123 aa11.81□□□□□ -0.52
CXCL12-204ENST00000395793 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
CXCL12-204ENST00000395793 SSTP61278 116 aa11.8□□□□□ -0.52
CXCL12-204ENST00000395793 MPV17L2Q567V2 206 aa11.8□□□□□ -0.52
CXCL12-204ENST00000395793 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
CXCL12-204ENST00000395793 ENHOQ6UWT2 76 aa11.8□□□□□ -0.52
CXCL12-204ENST00000395793 IGLV2-8P01709 118 aa11.79□□□□□ -0.52
CXCL12-204ENST00000395793 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
CXCL12-204ENST00000395793 GNG13Q9P2W3 67 aa11.79□□□□□ -0.52
CXCL12-204ENST00000395793 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
CXCL12-204ENST00000395793 GZMBP10144 247 aa11.78□□□□□ -0.52
CXCL12-204ENST00000395793 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
CXCL12-204ENST00000395793 ELOBQ15370 118 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms