RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 RITA1Q96K30 269 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 DKK4Q9UBT3 224 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 ATP5G1P05496 136 aa13.31□□□□□ -0.28
SIN3A-203ENST00000394949 TM2D2Q9BX73 214 aa13.31□□□□□ -0.28
SIN3A-203ENST00000394949 VPREB3Q9UKI3 123 aa13.31□□□□□ -0.28
SIN3A-203ENST00000394949 PTPN13Q12923 2485 aa13.31□□□□□ -0.28
SIN3A-203ENST00000394949 RBM3P98179 157 aaKnown RBP13.31□□□□□ -0.28
SIN3A-203ENST00000394949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.31□□□□□ -0.28
SIN3A-203ENST00000394949 IGKV2-29A2NJV5 120 aaPredicted RBP13.31□□□□□ -0.28
SIN3A-203ENST00000394949 CDK2AP2O75956 126 aa13.31□□□□□ -0.28
SIN3A-203ENST00000394949 CENPVL3A0A0U1RRI6 287 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 NDUFA11Q86Y39 141 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 OTOGLQ3ZCN5 2332 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 HIVEP2P31629 2446 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 IGKV1D-37A0A075B6S9 117 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 PIEZO1Q92508 2521 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 OBSL1O75147 1896 aa13.3□□□□□ -0.28
SIN3A-203ENST00000394949 GRNP28799 593 aaKnown RBP13.3□□□□□ -0.28
SIN3A-203ENST00000394949 Q6ZUT4 128 aa13.29□□□□□ -0.28
SIN3A-203ENST00000394949 CFHR3Q02985 330 aa13.29□□□□□ -0.28
SIN3A-203ENST00000394949 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
SIN3A-203ENST00000394949 IGLV1-47P01700 117 aa13.29□□□□□ -0.28
SIN3A-203ENST00000394949 BRWD1-AS2P59051 145 aa13.29□□□□□ -0.28
SIN3A-203ENST00000394949 A0A1B0GX51 115 aa13.28□□□□□ -0.28
SIN3A-203ENST00000394949 ZNF106Q9H2Y7 1883 aaKnown RBP13.28□□□□□ -0.28
SIN3A-203ENST00000394949 PRAC2D3DTV9 90 aa13.28□□□□□ -0.28
SIN3A-203ENST00000394949 E7EUB6 86 aa13.28□□□□□ -0.28
SIN3A-203ENST00000394949 TECTAO75443 2155 aa13.28□□□□□ -0.28
SIN3A-203ENST00000394949 SPANXB1Q9NS25 103 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-203ENST00000394949 LOXL1Q08397 574 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-203ENST00000394949 LGALS9O00182 355 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 DYSFO75923 2080 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 SPRY2O43597 315 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 IGHV4-59P01825 116 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
SIN3A-203ENST00000394949 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 U3KQE9 123 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.29
SIN3A-203ENST00000394949 NKAPP1Q8N9T2 125 aa13.27□□□□□ -0.29
SIN3A-203ENST00000394949 LINC00574Q9H8X3 128 aa13.26□□□□□ -0.29
SIN3A-203ENST00000394949 RS1O15537 224 aa13.26□□□□□ -0.29
SIN3A-203ENST00000394949 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
SIN3A-203ENST00000394949 EIF4EBP1Q13541 118 aaPredicted RBP13.26□□□□□ -0.29
SIN3A-203ENST00000394949 H3BQ85 93 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 PROP1O75360 226 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 MRPL23Q16540 153 aaKnown RBP13.25□□□□□ -0.29
SIN3A-203ENST00000394949 TRAV25A0A0B4J276 109 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 IGHV4-61A0A0C4DH41 118 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 LINC00643Q86TS7 51 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 MRAPQ8TCY5 172 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 PTH2Q96A98 100 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 CGB3P0DN86 165 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 CGB7P0DN87 165 aa13.25□□□□□ -0.29
SIN3A-203ENST00000394949 HOXD3P31249 432 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-203ENST00000394949 SPRY4Q9C004 299 aa13.24□□□□□ -0.29
SIN3A-203ENST00000394949 TCL1BO95988 128 aa13.24□□□□□ -0.29
SIN3A-203ENST00000394949 IGLC6P0CF74 106 aa13.24□□□□□ -0.29
SIN3A-203ENST00000394949 NCOA6Q14686 2063 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-203ENST00000394949 Q8N9W7 124 aa13.24□□□□□ -0.29
SIN3A-203ENST00000394949 JMJD7-PLA2G4BH0Y9G9 81 aa13.23□□□□□ -0.29
SIN3A-203ENST00000394949 DAZ2Q13117 558 aaKnown RBP13.23□□□□□ -0.29
SIN3A-203ENST00000394949 DAZ4Q86SG3 579 aaKnown RBP13.23□□□□□ -0.29
SIN3A-203ENST00000394949 DAZ3Q9NR90 486 aaKnown RBP13.23□□□□□ -0.29
SIN3A-203ENST00000394949 IGHV1-58A0A0C4DH39 117 aa13.23□□□□□ -0.29
SIN3A-203ENST00000394949 RNF183Q96D59 192 aa13.23□□□□□ -0.29
SIN3A-203ENST00000394949 DEFB113Q30KQ7 82 aa13.23□□□□□ -0.29
SIN3A-203ENST00000394949 NDUFV3P56181 108 aaKnown RBP13.22□□□□□ -0.29
SIN3A-203ENST00000394949 C20orf203Q8NBC4 194 aa13.22□□□□□ -0.29
SIN3A-203ENST00000394949 RMI2Q96E14 147 aa13.22□□□□□ -0.29
SIN3A-203ENST00000394949 K7EMT4 169 aa13.21□□□□□ -0.29
SIN3A-203ENST00000394949 CCL24O00175 119 aa13.21□□□□□ -0.3
SIN3A-203ENST00000394949 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.3
SIN3A-203ENST00000394949 TRAV4A0A0B4J268 109 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 IGKV3D-7A0A0C4DH55 119 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 AJUBAQ96IF1 538 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
SIN3A-203ENST00000394949 PSMB8P28062 276 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 Q8N1Y9 231 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 MT-ATP8P03928 68 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 COX7B2Q8TF08 81 aa13.2□□□□□ -0.3
SIN3A-203ENST00000394949 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-203ENST00000394949 IGHV4-30-2A0A087WSY4 118 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 DAZAP2Q15038 168 aaPredicted RBP13.19□□□□□ -0.3
SIN3A-203ENST00000394949 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 ARHGAP21Q5T5U3 1957 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 NCKAP5O14513 1909 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 IGHG2P01859 326 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 FREM1Q5H8C1 2179 aa13.19□□□□□ -0.3
SIN3A-203ENST00000394949 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 K7EQD1 137 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 PLA2G5P39877 138 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 XCL1P47992 114 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 U3KQK5 164 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 IGHV3-30-3P0DP02 117 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 MIAQ16674 131 aa13.18□□□□□ -0.3
SIN3A-203ENST00000394949 ZNF80P51504 273 aaPredicted RBP13.17□□□□□ -0.3
SIN3A-203ENST00000394949 NOP10Q9NPE3 64 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms