RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 LTAP01374 205 aa13.1□□□□□ -0.31
UPK3B-203ENST00000394849 ZC2HC1AQ96GY0 325 aa13.1□□□□□ -0.31
UPK3B-203ENST00000394849 DNAH8Q96JB1 4490 aa13.09□□□□□ -0.31
UPK3B-203ENST00000394849 SH2D1AO60880 128 aa13.08□□□□□ -0.32
UPK3B-203ENST00000394849 S100A4P26447 101 aaKnown RBP13.08□□□□□ -0.32
UPK3B-203ENST00000394849 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.32
UPK3B-203ENST00000394849 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.32
UPK3B-203ENST00000394849 B4DEV8 164 aa13.07□□□□□ -0.32
UPK3B-203ENST00000394849 BLOC1S1P78537 153 aa13.07□□□□□ -0.32
UPK3B-203ENST00000394849 COX8CQ7Z4L0 72 aa13.07□□□□□ -0.32
UPK3B-203ENST00000394849 BAGE2Q86Y30 109 aa13.07□□□□□ -0.32
UPK3B-203ENST00000394849 IGKV3D-20A0A0C4DH25 116 aa13.06□□□□□ -0.32
UPK3B-203ENST00000394849 M0R036 132 aa13.06□□□□□ -0.32
UPK3B-203ENST00000394849 BCL2P10415 239 aa13.06□□□□□ -0.32
UPK3B-203ENST00000394849 ASIPP42127 132 aa13.06□□□□□ -0.32
UPK3B-203ENST00000394849 CRIP1P50238 77 aa13.06□□□□□ -0.32
UPK3B-203ENST00000394849 MEF2BQ02080 365 aaPredicted RBP13.06□□□□□ -0.32
UPK3B-203ENST00000394849 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
UPK3B-203ENST00000394849 PDE6DO43924 150 aa13.05□□□□□ -0.32
UPK3B-203ENST00000394849 CIDEAO60543 219 aa13.05□□□□□ -0.32
UPK3B-203ENST00000394849 GATA1P15976 413 aaPredicted RBP13.05□□□□□ -0.32
UPK3B-203ENST00000394849 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
UPK3B-203ENST00000394849 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
UPK3B-203ENST00000394849 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
UPK3B-203ENST00000394849 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
UPK3B-203ENST00000394849 C9orf85Q96MD7 179 aa13.05□□□□□ -0.32
UPK3B-203ENST00000394849 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
UPK3B-203ENST00000394849 TRAV8-3A0A0A6YYJ7 113 aa13.04□□□□□ -0.32
UPK3B-203ENST00000394849 LOC100131303A0A0U1RQF7 123 aa13.04□□□□□ -0.32
UPK3B-203ENST00000394849 LELP1Q5T871 98 aa13.04□□□□□ -0.32
UPK3B-203ENST00000394849 LRP1Q07954 4544 aaKnown RBP13.03□□□□□ -0.32
UPK3B-203ENST00000394849 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 IGHV3-33P01772 117 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
UPK3B-203ENST00000394849 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 PRADC1Q9BSG0 188 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 DERL1Q9BUN8 251 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 MED9Q9NWA0 146 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 COX11Q9Y6N1 276 aa13.03□□□□□ -0.32
UPK3B-203ENST00000394849 TMSB15BA0A087X1C1 80 aa13.02□□□□□ -0.33
UPK3B-203ENST00000394849 KRBOX1C9JBD0 128 aa13.02□□□□□ -0.33
UPK3B-203ENST00000394849 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
UPK3B-203ENST00000394849 PRR27Q6MZM9 219 aa13.02□□□□□ -0.33
UPK3B-203ENST00000394849 GRIFINA4D1Z8 144 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 H3BVH4 76 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 RHOHQ15669 191 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 CENPWQ5EE01 88 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 CHAC1Q9BUX1 264 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 MLST8Q9BVC4 326 aa13.01□□□□□ -0.33
UPK3B-203ENST00000394849 TRBV6-4A0A1B0GX49 114 aa13□□□□□ -0.33
UPK3B-203ENST00000394849 PGPEP1LA6NFU8 196 aa13□□□□□ -0.33
UPK3B-203ENST00000394849 KRTAP10-4P60372 401 aaPredicted RBP13□□□□□ -0.33
UPK3B-203ENST00000394849 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
UPK3B-203ENST00000394849 SLC25A29Q8N8R3 303 aa13□□□□□ -0.33
UPK3B-203ENST00000394849 GTSF1LQ9H1H1 148 aa13□□□□□ -0.33
UPK3B-203ENST00000394849 IL36BQ9NZH7 164 aa13□□□□□ -0.33
UPK3B-203ENST00000394849 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
UPK3B-203ENST00000394849 MGST1P10620 155 aaKnown RBP12.99□□□□□ -0.33
UPK3B-203ENST00000394849 GNG4P50150 75 aa12.99□□□□□ -0.33
UPK3B-203ENST00000394849 WFDC2Q14508 124 aa12.99□□□□□ -0.33
UPK3B-203ENST00000394849 PTH2Q96A98 100 aa12.99□□□□□ -0.33
UPK3B-203ENST00000394849 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.98□□□□□ -0.33
UPK3B-203ENST00000394849 RAB19A4D1S5 217 aa12.98□□□□□ -0.33
UPK3B-203ENST00000394849 RS1O15537 224 aa12.98□□□□□ -0.33
UPK3B-203ENST00000394849 DNLZQ5SXM8 178 aa12.98□□□□□ -0.33
UPK3B-203ENST00000394849 Q8N976 141 aa12.98□□□□□ -0.33
UPK3B-203ENST00000394849 RBFOX3A6NFN3 312 aa12.97□□□□□ -0.33
UPK3B-203ENST00000394849 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
UPK3B-203ENST00000394849 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
UPK3B-203ENST00000394849 ATP6V0E2Q8NHE4 81 aa12.97□□□□□ -0.33
UPK3B-203ENST00000394849 LYPD6BQ8NI32 183 aa12.97□□□□□ -0.33
UPK3B-203ENST00000394849 PHLDA3Q9Y5J5 127 aa12.97□□□□□ -0.33
UPK3B-203ENST00000394849 IGHV3-73A0A0B4J1V6 119 aa12.96□□□□□ -0.33
UPK3B-203ENST00000394849 A8MWV9 139 aa12.96□□□□□ -0.33
UPK3B-203ENST00000394849 IGLV2-8P01709 118 aa12.96□□□□□ -0.33
UPK3B-203ENST00000394849 RMI2Q96E14 147 aa12.96□□□□□ -0.33
UPK3B-203ENST00000394849 DAZAP1Q96EP5 407 aaKnown RBP12.96□□□□□ -0.33
UPK3B-203ENST00000394849 SMIM12Q96EX1 92 aa12.96□□□□□ -0.33
UPK3B-203ENST00000394849 LECT2O14960 151 aa12.95□□□□□ -0.34
UPK3B-203ENST00000394849 PIK3CD-AS1Q5SR53 167 aa12.95□□□□□ -0.34
UPK3B-203ENST00000394849 M0R381 172 aa12.94□□□□□ -0.34
UPK3B-203ENST00000394849 CIRBP-AS1Q8TBR5 109 aa12.94□□□□□ -0.34
UPK3B-203ENST00000394849 EIF5A2Q9GZV4 153 aaKnown RBP12.94□□□□□ -0.34
UPK3B-203ENST00000394849 BIN3Q9NQY0 253 aa12.94□□□□□ -0.34
UPK3B-203ENST00000394849 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
UPK3B-203ENST00000394849 CXCL1P09341 107 aa12.93□□□□□ -0.34
UPK3B-203ENST00000394849 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
UPK3B-203ENST00000394849 ZFP82Q8N141 532 aa12.93□□□□□ -0.34
UPK3B-203ENST00000394849 PARLQ9H300 379 aa12.93□□□□□ -0.34
UPK3B-203ENST00000394849 TRBV20OR9-2A0A075B6H5 130 aa12.92□□□□□ -0.34
UPK3B-203ENST00000394849 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
UPK3B-203ENST00000394849 CEBPGP53567 150 aa12.92□□□□□ -0.34
UPK3B-203ENST00000394849 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
UPK3B-203ENST00000394849 BAALCQ8WXS3 180 aa12.92□□□□□ -0.34
UPK3B-203ENST00000394849 A0A087WWC5 75 aa12.91□□□□□ -0.34
UPK3B-203ENST00000394849 LINC01620Q4KN68 170 aa12.91□□□□□ -0.34
UPK3B-203ENST00000394849 OR2D3Q8NGH3 330 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms