RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 FABP9Q0Z7S8 132 aa17.32■□□□□ 0.36
LRFN4-202ENST00000393952 DPH3P1Q9H4G8 78 aa17.32■□□□□ 0.36
LRFN4-202ENST00000393952 DNAH9Q9NYC9 4486 aa17.31■□□□□ 0.36
LRFN4-202ENST00000393952 CRYGDP07320 174 aa17.31■□□□□ 0.36
LRFN4-202ENST00000393952 CFAP126Q5VTH2 177 aa17.31■□□□□ 0.36
LRFN4-202ENST00000393952 FAM104BQ5XKR9 115 aa17.31■□□□□ 0.36
LRFN4-202ENST00000393952 NDUFAF3Q9BU61 184 aa17.31■□□□□ 0.36
LRFN4-202ENST00000393952 DKK2Q9UBU2 259 aa17.31■□□□□ 0.36
LRFN4-202ENST00000393952 HUWE1Q7Z6Z7 4374 aaKnown RBP17.3■□□□□ 0.36
LRFN4-202ENST00000393952 LYRM9A8MSI8 78 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 A8MWV9 139 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 RS1O15537 224 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 APCSP02743 223 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 TRGC2P03986 189 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 SMIM17P0DL12 118 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 FAM74A4Q5TZK3 123 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 LINC00612Q8N6U2 182 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 POM121L12Q8N7R1 296 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 RNF185Q96GF1 192 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 CELA1Q9UNI1 258 aa17.3■□□□□ 0.36
LRFN4-202ENST00000393952 DEFB130BP0DP73 79 aa17.29■□□□□ 0.36
LRFN4-202ENST00000393952 DEFB130AP0DP74 79 aa17.29■□□□□ 0.36
LRFN4-202ENST00000393952 LINC00315P59091 139 aa17.29■□□□□ 0.36
LRFN4-202ENST00000393952 ZMAT4Q9H898 229 aa17.29■□□□□ 0.36
LRFN4-202ENST00000393952 MGPP08493 103 aa17.28■□□□□ 0.36
LRFN4-202ENST00000393952 RAB4AP20338 218 aa17.28■□□□□ 0.36
LRFN4-202ENST00000393952 KIAA1644Q3SXP7 199 aa17.28■□□□□ 0.36
LRFN4-202ENST00000393952 C11orf68Q9H3H3 251 aaKnown RBP17.28■□□□□ 0.36
LRFN4-202ENST00000393952 TRGV2A0A075B6R0 118 aa17.28■□□□□ 0.36
LRFN4-202ENST00000393952 MRPL51Q4U2R6 128 aaKnown RBP17.28■□□□□ 0.36
LRFN4-202ENST00000393952 IGHV3-73A0A0B4J1V6 119 aa17.27■□□□□ 0.35
LRFN4-202ENST00000393952 OR4C5Q8NGB2 326 aa17.27■□□□□ 0.35
LRFN4-202ENST00000393952 TRAV4A0A0B4J268 109 aa17.26■□□□□ 0.35
LRFN4-202ENST00000393952 A0A0J9YWU9 116 aa17.26■□□□□ 0.35
LRFN4-202ENST00000393952 IGHV3-53P01767 116 aa17.26■□□□□ 0.35
LRFN4-202ENST00000393952 SPART-AS1P0CW21 52 aa17.26■□□□□ 0.35
LRFN4-202ENST00000393952 UFSP1Q6NVU6 142 aa17.26■□□□□ 0.35
LRFN4-202ENST00000393952 PHOX2AO14813 284 aa17.25■□□□□ 0.35
LRFN4-202ENST00000393952 ZNF479Q96JC4 524 aa17.25■□□□□ 0.35
LRFN4-202ENST00000393952 TRAV26-2A0A0B4J265 109 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 F5H697 171 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 ZNF56Q15929 161 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 PRKDCP78527 4128 aaKnown RBP17.23■□□□□ 0.35
LRFN4-202ENST00000393952 SMKR1H3BMG3 65 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 RHODO00212 210 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 NCR2O95944 276 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 DAD1P61803 113 aa17.23■□□□□ 0.35
LRFN4-202ENST00000393952 GAS8-AS1O95177 125 aa17.22■□□□□ 0.35
LRFN4-202ENST00000393952 C18orf15Q96N68 181 aa17.22■□□□□ 0.35
LRFN4-202ENST00000393952 D6R8Y8 96 aa17.21■□□□□ 0.35
LRFN4-202ENST00000393952 SUMO4Q6EEV6 95 aa17.21■□□□□ 0.35
LRFN4-202ENST00000393952 ZFP2Q6ZN57 461 aa17.21■□□□□ 0.35
LRFN4-202ENST00000393952 TEX48A0A1B0GUV7 120 aa17.2■□□□□ 0.34
LRFN4-202ENST00000393952 CKS2P33552 79 aa17.2■□□□□ 0.34
LRFN4-202ENST00000393952 Q6ZSN1 163 aa17.2■□□□□ 0.34
LRFN4-202ENST00000393952 COL7A1Q02388 2944 aa17.2■□□□□ 0.34
LRFN4-202ENST00000393952 GATA1P15976 413 aaPredicted RBP17.19■□□□□ 0.34
LRFN4-202ENST00000393952 MRAP2Q96G30 205 aa17.19■□□□□ 0.34
LRFN4-202ENST00000393952 U3KQK5 164 aa17.19■□□□□ 0.34
LRFN4-202ENST00000393952 C1orf196B1AJZ1 125 aa17.19■□□□□ 0.34
LRFN4-202ENST00000393952 SRIP30626 198 aa17.19■□□□□ 0.34
LRFN4-202ENST00000393952 ORMDL3Q8N138 153 aa17.19■□□□□ 0.34
LRFN4-202ENST00000393952 ALKBH7Q9BT30 221 aaPredicted RBP17.19■□□□□ 0.34
LRFN4-202ENST00000393952 NHLRC4P0CG21 123 aaPredicted RBP17.18■□□□□ 0.34
LRFN4-202ENST00000393952 C12orf74Q32Q52 190 aa17.18■□□□□ 0.34
LRFN4-202ENST00000393952 PRELID3AQ96N28 172 aa17.17■□□□□ 0.34
LRFN4-202ENST00000393952 PPBPP02775 128 aa17.16■□□□□ 0.34
LRFN4-202ENST00000393952 TRGV4A0A0C4DH28 118 aa17.15■□□□□ 0.34
LRFN4-202ENST00000393952 CIDEAO60543 219 aa17.15■□□□□ 0.34
LRFN4-202ENST00000393952 FHL2Q14192 279 aa17.15■□□□□ 0.34
LRFN4-202ENST00000393952 M0QY20 66 aa17.15■□□□□ 0.34
LRFN4-202ENST00000393952 NPYP01303 97 aa17.15■□□□□ 0.34
LRFN4-202ENST00000393952 NRACQ8N912 160 aa17.15■□□□□ 0.34
LRFN4-202ENST00000393952 RPL39LQ96EH5 51 aaKnown RBP17.15■□□□□ 0.34
LRFN4-202ENST00000393952 HIST1H2BKO60814 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BJP06899 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 P0DMU3 169 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 FAM231AP0DMU4 169 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 FAM231CP0DMU5 169 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BOP23527 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BBP33778 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BDP58876 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BCP62807 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST2H2BEQ16778 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.14■□□□□ 0.33
LRFN4-202ENST00000393952 C11orf45Q8TAV5 145 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BHQ93079 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BNQ99877 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 HIST1H2BMQ99879 126 aa17.14■□□□□ 0.33
LRFN4-202ENST00000393952 ATP5G1P05496 136 aa17.13■□□□□ 0.33
LRFN4-202ENST00000393952 HOXA5P20719 270 aa17.13■□□□□ 0.33
LRFN4-202ENST00000393952 TNFRSF6BO95407 300 aa17.12■□□□□ 0.33
LRFN4-202ENST00000393952 NANOS2P60321 138 aaKnown RBP17.12■□□□□ 0.33
LRFN4-202ENST00000393952 RAB5BP61020 215 aa17.12■□□□□ 0.33
LRFN4-202ENST00000393952 EDA2RQ9HAV5 297 aa17.12■□□□□ 0.33
LRFN4-202ENST00000393952 SLC25A29Q8N8R3 303 aa17.11■□□□□ 0.33
LRFN4-202ENST00000393952 Q9UF83 564 aa17.11■□□□□ 0.33
LRFN4-202ENST00000393952 H7C1H1 209 aa17.11■□□□□ 0.33
LRFN4-202ENST00000393952 HTN3P15516 51 aa17.11■□□□□ 0.33
LRFN4-202ENST00000393952 IQCJQ1A5X6 159 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms